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Series GSE43737 Query DataSets for GSE43737
Status Public on Jan 09, 2022
Title The Replication Kinase Cdc7 Marks Histones to Regulate Biosynthesis Genes
Organism Saccharomyces cerevisiae
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary We demonstrate that the Cdc7/Dbf4-dependent histone modification, H3 threonine 45 phosphorylation (H3T45p), is specifically enriched at origins of replication, and highly transcribed genes involved in protein synthesis and glycolysis. Furthermore, we show that H3T45p also mediates polymerase recruitment and expression of these genes.
 
Overall design Histone H3 threonine 45 phosphorylation mapped in S. cerevisiae using ChIP-seq
 
Contributor(s) Sendinc E, Hoang SA, Xu X, Zakari M, Gerton JL, Bekiranov S, Grant PA
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Submission date Jan 24, 2013
Last update date Jan 09, 2022
Contact name Stephen Aurelien Hoang
Organization name HemoShear Therapeutics
Street address 501 Locust Ave, Suite 301
City Charlottesville
State/province Virginia
ZIP/Postal code 22902
Country USA
 
Platforms (1)
GPL9377 Illumina Genome Analyzer II (Saccharomyces cerevisiae)
Samples (4)
GSM1070091 H3T45p_HU+_ChIP-seq 1
GSM1070092 panH3_HU+_ChIP-seq 1
GSM1070093 H3T45p_HU-_ChIP-seq 2
Relations
BioProject PRJNA187389
SRA SRP018229

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE43737_H3T45p_HU_treated_minus_H3_HU_treated_150bp_window_differential.bed.gz 1.5 Mb (ftp)(http) BED
GSE43737_H3T45p_untreated_minus_H3_untreated_150bp_window_differential.bed.gz 1.5 Mb (ftp)(http) BED
GSE43737_RAW.tar 4.9 Mb (http)(custom) TAR (of BED)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

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