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Series GSE42760 Query DataSets for GSE42760
Status Public on Jun 30, 2013
Title The microRNA cluster miR-17~92 promotes TFH cell differentiation and represses subset-inappropriate gene expression
Organism Mus musculus
Experiment type Expression profiling by array
Summary Follicular helper T cells (TFH cells) are the prototypic helper T cell subset specialized to enable B cells to form germinal centers (GCs) and produce high-affinity antibodies. We found that expression of microRNAs (miRNAs) by T cells was essential for TFH cell differentiation. More specifically, we show that after immunization of mice with protein, the miRNA cluster miR-17~92 was critical for robust differentiation and function of TFH cells in a cell-intrinsic manner that occurred regardless of changes in proliferation. In a viral infection model, miR-17~92 restrained the expression of genes ‘inappropriate’ to the TFH cell subset, including the direct miR-17~92 target Rora. Removal of one Rora allele partially ‘rescued’ the inappropriate gene signature in miR-17~92-deficient TFH cells. Our results identify the miR-17~92 cluster as a critical regulator of T cell–dependent antibody responses, TFH cell differentiation and the fidelity of the TFH cell gene-expression program.
 
Overall design Gene expression analysis of control versus miR-17~92 knockout (KO) LCMV-specific SMARTA TFH cells 5.5 days after viral infection.
 
Contributor(s) Baumjohann D, Kageyama R, Jeker LT, Ansel KM
Citation(s) 23812098
Submission date Dec 05, 2012
Last update date Jan 12, 2017
Contact name Dirk Baumjohann
E-mail(s) [email protected]
Organization name University Hospital Bonn
Department Medical Clinic III
Lab Baumjohann Lab
Street address Venusberg-Campus 1
City Bonn
State/province NRW
ZIP/Postal code 53127
Country Germany
 
Platforms (1)
GPL7202 Agilent-014868 Whole Mouse Genome Microarray 4x44K G4122F (Probe Name version)
Samples (8)
GSM1049499 Control TFH rep1
GSM1049500 Control TFH rep2
GSM1049501 Control TFH rep3
Relations
BioProject PRJNA183070

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE42760_RAW.tar 17.5 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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