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Series GSE40098 Query DataSets for GSE40098
Status Public on Nov 01, 2012
Title RNA expression analysis of pancreatic cancer and non-malignant pancreas cell lines
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Genome wide expression profiling of 20 PDAC cell lines and an immortalized non-malignant pancreatic duct cell line (HPDE) to facilitate identification of novel tumor suppressor genes using an integrative genomics approach
Genome wide expression profiling of 20 PDAC cell lines and an immortalized non-malignant pancreatic duct cell line (HPDE) to facilitate identification of novel tumor suppressor genes using an integrative genomics approach
 
Overall design RNA from the 21 samples was converted to Cy3 labeled cRNA and hybridized to the array; arrays were processed with GenePix software and median array normalization was performed
 
Contributor(s) Thu KL, Lam WL
Citation(s) 23318427
Submission date Aug 14, 2012
Last update date Jan 23, 2019
Contact name Kelsie L Thu
Organization name BC Cancer Research Centre
Street address 675 West 10th Avenue
City Vancouver
State/province British Columbia
ZIP/Postal code V5Z 1L3
Country Canada
 
Platforms (1)
GPL6480 Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Probe Name version)
Samples (21)
GSM984880 RNA from AsPC-1 cell line
GSM984881 RNA from BxPC-3 cell line
GSM984882 RNA from Capan-1 cell line
This SubSeries is part of SuperSeries:
GSE40099 Pancreatic cancer and non-malignant pancreas cell lines
Relations
BioProject PRJNA172916

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE40098_RAW.tar 67.6 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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