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Series GSE39629 Query DataSets for GSE39629
Status Public on Jan 01, 2013
Title Esophageal epithelium of 12 weeks old mice (WT, Nrf2-/-) on C57BL background with or without gastroesophageal reflux for 4 weeks.
Organism Mus musculus
Experiment type Expression profiling by array
Summary Transcriptional profiling of adult esophageal epithelium comparing wild-type mice with Nrf2-/- mice with or without gastroesophageal reflux for 4 weeks. Goal was to determine the role of Nrf2 on the barrier function of mouse esophageal epithelium.
 
Overall design Two-class comparisons. Wild-type/without reflux vs. Nrf2-/-/without reflux; Wild-type/gastric reflux vs. Nrf2-/-/gastric reflux; Wild-type/duodenal reflux vs. Nrf2-/-/duodenal reflux; Wild-type/mixed reflux vs. Nrf2-/-/mixed reflux. Biological replicates: 3 replicates for each group.
 
Contributor(s) Chen H, Chen XL
Citation(s) 23639809, 23676441
Submission date Jul 25, 2012
Last update date Jan 12, 2017
Contact name Hao Chen
E-mail(s) [email protected]
Organization name North Carolina Central University
Department BBRI
Lab Xiaoxin Luke Chen's Lab
Street address 700 George Street
City Durham
ZIP/Postal code 27707
Country USA
 
Platforms (1)
GPL7202 Agilent-014868 Whole Mouse Genome Microarray 4x44K G4122F (Probe Name version)
Samples (24)
GSM973395 Wild-type/without reflux replicate 1
GSM973396 Wild-type/without reflux replicate 2
GSM973397 Wild-type/without reflux replicate 3
Relations
BioProject PRJNA171332

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE39629_RAW.tar 377.1 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table
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