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Series GSE38851 Query DataSets for GSE38851
Status Public on Mar 19, 2013
Title The E3 ubiquitin ligase Siah2 contributes to castration-resistant prostate cancer by regulation of androgen receptor transcriptional activity
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Analysis of gene expression altered upon knockdown of Siah2 in prosate cancer cells. The objective is to elucidate which signaling pathways or transcription factors are regulated by the E3 ubiquitin ligase Siah2 in human prostate cancer cells.
 
Overall design CWR22Rv1 cells were in fected with pLKO.1 control or Siah2 shRNA, and selected with 1ug/ml of puromycin to get stable transfectants. Total RNA was extracted for micorarray analysis to compare the diffentially expressed genes between pLKO.1 control and Siah2 knockdown cells.
 
Contributor(s) Qi J, Tripathi M, Sahgal N, Ettinger S, Placzek WJ, Claps G, Chung LK, Bowtel D, Gleave M, Bhowmick N, Ronai ZA
Citation(s) 23518348
Submission date Jun 21, 2012
Last update date Aug 13, 2018
Contact name Natasha Sahgal
Organization name University of Oxford
Department Ludwig Institute of Cancer Research
Street address Old Road Campus
City Oxford
ZIP/Postal code OX3 7DQ
Country United Kingdom
 
Platforms (1)
GPL10558 Illumina HumanHT-12 V4.0 expression beadchip
Samples (4)
GSM950720 Rv1 pLKO.1 rep1
GSM950721 Rv1 pLKO.1 rep2
GSM950722 Rv1 shSiah2 rep1
Relations
BioProject PRJNA169149

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE38851_RAW.tar 26.2 Mb (http)(custom) TAR
GSE38851_non-normalized.txt.gz 904.3 Kb (ftp)(http) TXT
Processed data included within Sample table

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