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Series GSE37289 Query DataSets for GSE37289
Status Public on Dec 31, 2021
Title In Vivo Organ Regeneration via Stroma-Dependent Adult Lineage Reprogramming (mRNA)
Organism Mus musculus
Experiment type Expression profiling by array
Summary Remarkable progress has been made in cell fate reprogramming by forced expression of a small number of transcription factors. Major challenges remain, however, in regenerative medicine regarding how to target multiple cell types and direct them to form a functional organ in vivo. Here, we demonstrate that, by changing their stromal microenvironment, adult differentiated cells of endodermal origin can be reprogrammed to generate a functional ectodermal organ. The process of organ regeneration is highly efficient and complete, and depends on epithelial-stromal interactions that lead to successful remodeling of the extracellular matrix and stromal cells that are essential for organ function. Furthermore, it is a multistep process consisting of changes in cell fate, where dedifferentiation occurs more rapidly than redifferentiation, and subsequent morphogenetic reprogramming. Remarkably, neither direct transdifferentiation nor a complete reversion to the pluripotency state is involved in the reprogramming process; instead it features dynamic activities of essential genes that regulate pluripotency and lineage development. Our data have important implications for stem cell biology, cancer biology, and regenerative medicine.
 
Overall design Three replicates of adult and reprogrammed mouse lung and mammary cells were profiled for mRNAs
 
Contributor(s) Sims AH
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Submission date Apr 16, 2012
Last update date Dec 31, 2021
Contact name Andrew H Sims
E-mail(s) [email protected]
Organization name University of Edinburgh
Department Institute of Genetics and Molecular Medicine
Lab Applied Bioinformatics of Cancer
Street address Systems Medicine Building
City Carrington Crescent
State/province Edinburgh
ZIP/Postal code EH4 2XR
Country United Kingdom
 
Platforms (1)
GPL7202 Agilent-014868 Whole Mouse Genome Microarray 4x44K G4122F (Probe Name version)
Samples (12)
GSM915647 Mouse Lung epithelial cells rep1
GSM915648 Mouse Lung epithelial cells rep2
GSM915649 Mouse Lung epithelial cells rep3
This SubSeries is part of SuperSeries:
GSE37309 In Vivo Organ Regeneration via Stroma-Dependent Adult Lineage Reprogramming
Relations
BioProject PRJNA159473

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE37289_RAW.tar 26.1 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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