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Series GSE35993 Query DataSets for GSE35993
Status Public on May 23, 2012
Title Notch regulated miRNAs in human T-ALL cell line
Platform organisms Homo sapiens; Mus musculus; Rattus norvegicus; Human alphaherpesvirus 1; Human betaherpesvirus 5; Murid betaherpesvirus 1; human gammaherpesvirus 4; JC polyomavirus; Human immunodeficiency virus 1; Murid gammaherpesvirus 4; Human gammaherpesvirus 8; Betapolyomavirus hominis; Betapolyomavirus macacae
Sample organism Homo sapiens
Experiment type Non-coding RNA profiling by array
Summary In an attempt to identify miRNAs regulated by oncogenic Notch signaling, we performed miRNA profiling of human T-cell acute lymphoblastic leukemia (T-ALL) cells with or without the treatment of γ-secretase inhibitor (GSI) to block Notch signaling. We found miR-223 levels to increase after GSI treatment suggesting that active Notch signaling represses miR-223 expression. We confirmed insulin-like growth factor-1 receptor (IGF1R) to be regulated by miR-223, but were unable to demonstrate functional effects on T-ALL cell growth by overexpression or knock-down of miR-223 alone.
 
Overall design 4 samples analyzed, 2 cell lines each treated (GSI) and mock treated
 
Contributor(s) Gusscott SD, Weng AP
Citation(s) 22424712
Submission date Feb 21, 2012
Last update date May 10, 2016
Contact name Andrew P Weng
E-mail(s) [email protected]
Phone 604-675-8136
Fax 604-877-0712
Organization name BC Cancer Agency
Department Pathology
Lab Terry Fox Laboratory
Street address 675 West 10th Ave
City Vancouver
State/province BC
ZIP/Postal code V5Z 1L3
Country Canada
 
Platforms (1)
GPL7723 miRCURY LNA microRNA Array, v.11.0 - hsa, mmu & rno
Samples (4)
GSM879010 Jurkat_washout-Mock_24h
GSM879011 Jurkat_washout-GSI_24h
GSM879012 P12_washout-Mock_24h
Relations
BioProject PRJNA151683

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE35993_RAW.tar 6.6 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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