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Series GSE3416 Query DataSets for GSE3416
Status Public on Dec 01, 2005
Title Diurnal gene expression in Arabidopsis thaliana Col-0 rosette leaves
Organism Arabidopsis thaliana
Experiment type Expression profiling by array
Summary How do the transcript levels of leaf-expressed genes change in a normal day-night cycle? The interest is in genes that are regulated by the circadian clock and the diurnal component (i.e. light, metabolite changes). Plants were grown on soil in a 12/12 h light/dark rythm at 20°C day and night. 5 weeks after germination the rosettes of the non-flowering plants were harvested, 15 plants per sample. Plants were harvested at 6 timepoints every 4 hours beginning with the end of the night (still in darkness).
Keywords: repeat
 
Overall design 3 biological replicates of the diurnal time series (6 times) were analyzed that were separately grown
Web link http://www.arabidopsis.org
 
Contributor(s) Bläsing OE, Stitt M
Citation(s) 16299223
Submission date Oct 05, 2005
Last update date Aug 28, 2018
Contact name Oliver E Bläsing
E-mail(s) [email protected]
Phone +49 (0) 331 5678114
Fax +49 (0) 331 5678 134
Organization name Max-Planck-Institut Molekulare Pflanzenphysiologie
Department Abt. Stitt
Lab Stitt
Street address Am Mühlenberg 1
City Potsdam-Golm
ZIP/Postal code D-14476
Country Germany
 
Platforms (1)
GPL198 [ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array
Samples (18)
GSM77055 00h Col-0 replicate A
GSM77056 00h Col-0 replicate B
GSM77057 00h Col-0 replicate C
Relations
BioProject PRJNA93443

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE3416_RAW.tar 60.7 Mb (http)(custom) TAR (of CEL)

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