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Series GSE27494 Query DataSets for GSE27494
Status Public on Jun 27, 2012
Title IL-1 Exposure Significantly increases gene expression of BDNF, NTF3 and NRP2 as well as NGF Production in Human Annulus Cells
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Although the degenerating disc is considered to be the key source of pain in patients with low back pain, the relationship between disc cells, nerves, and pain production is poorly understood. Neurotrophins are signaling molecules involved in the survival, differentiation, migration, and neurite outgrowth of central and peripheral neurons. Neurotrophins are now known to be expressed in non-neuronal tissues, including the intervertebral disc. We hypothesize that the inflammatory cytokine interleukin-1 (IL-1beta), which is produced by disc cells during degeneration, is a key element in the cascade of events involving neurotrophins. To test this, we used an in vitro experimental design which challenged 3D-cultured human annulus cells with IL-1beta and utilized microarray analysis to evaluate neurotrophin- and nerve-related gene expression profiles in treated vs. control cells. Analysis of nerve growth factor levels in conditioned media was also performed.
Findings presented here support the hypothesis that proinflammatory cytokines (which are produced by disc cells during degeneration) are involved with a significant increase in the expression of neurotrophins and other nerve-related genes. Findings expand previous data on expression of neurotrophins in the degenerating disc, and provide the first documentation of expression of neurotrophin 3 and neuropilin 2. These results have direct translational relevance because they address the primary clinical issue with disc degeneration (low back pain) and open the possibility of novel analgesic therapies based on development of specific small-molecular antagonists to neurotrophins.
 
Overall design Human disc tissue samples were obtained from surgical disc procedures performed on patients with herniated discs and degenerative disc disease. Cultured annulus cells were grown in a 3D collagen construct with or without 10 2 pM IL-1 for a total of 14 days. Following homogenization in TRIzol reagent, total RNA was isolated and analyzed via mircoarray.
 
Contributor(s) Gruber HE, Hoelscher GL, Bethea S, Hanley EN Jr
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Submission date Feb 24, 2011
Last update date Oct 28, 2012
Contact name Helen Gruber
E-mail(s) [email protected]
Organization name Carolinas HealthCare System
Department Orthopaedic Surgery
Lab Orthopaedic Research
Street address 1542 Graden Terrace
City Charlotte
State/province NC
ZIP/Postal code 28203
Country USA
 
Platforms (1)
GPL1352 [U133_X3P] Affymetrix Human X3P Array
Samples (8)
GSM679415 Disc Cells in 3D Control (95)
GSM679416 Disc Cells in 3D IL-1 (95)
GSM679417 Disc Cells in 3D Control (107)
Relations
BioProject PRJNA138423

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE27494_RAW.tar 35.5 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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