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| Status |
Public on Mar 31, 2011 |
| Title |
Stromal molecular signatures of breast and prostate cancer |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by array
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| Summary |
Primary tumor growth induces host tissue responses that are believed to support and promote tumor progression. Identification of the molecular characteristics of the tumor microenvironment and elucidation of its crosstalk with tumor cells may therefore be crucial for improving our understanding of the processes implicated in cancer progression, identifying potential therapeutic targets, and uncovering stromal gene expression signatures that may predict clinical outcome. A key issue to resolve, therefore, is whether the stromal response to tumor growth is largely a generic phenomenon, irrespective of the tumor type, or whether the response reflects tumor-specific properties. To address similarity or distinction of stromal gene expression changes during cancer progression, oligonucleotide-based Affymetrix microarray technology was used to compare the transcriptomes of laser-microdissected stromal cells derived from invasive human breast and prostate carcinoma. Invasive breast and prostate cancer-associated stroma was observed to display distinct transcriptomes, with a limited number of shared genes. Interestingly, both breast and prostate tumor-specific dysregulated stromal genes were observed to cluster breast and prostate cancer patients, respectively, into two distinct groups with statistically different clinical outcomes. By contrast, a gene signature that was common to the reactive stroma of both tumor types did not have survival predictive value. Univariate Cox analysis identified genes whose expression level was most strongly associated with patient survival. Taken together, these observations suggest that the tumor microenvironment displays distinct features according to the tumor type that provides survival-predictive value.
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| Overall design |
6 samples of stroma surrounding invasive breast primary tumors; 6 matched samples of normal stroma. 6 samples of stroma surrounding invasive prostate primary tumors; 6 matched samples of normal stroma.
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| Contributor(s) |
Planche A, Bacac M, Provero P, Fusco C, Delorenzi M, Stehle J, Stamenkovic I |
| Citation(s) |
21611158 |
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| Submission date |
Jan 27, 2011 |
| Last update date |
Mar 25, 2019 |
| Contact name |
Paolo Provero |
| E-mail(s) |
[email protected]
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| Organization name |
University of Turin
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| Department |
Molecular Biotechnology and Health Sciences
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| Street address |
Via Nizza 52
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| City |
Torino |
| ZIP/Postal code |
I-10100 |
| Country |
Italy |
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| Platforms (1) |
| GPL570 |
[HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array |
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| Samples (24)
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| Relations |
| BioProject |
PRJNA136171 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE26910_RAW.tar |
104.1 Mb |
(http)(custom) |
TAR (of CEL) |
| Processed data included within Sample table |
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