|
| Status |
Public on May 17, 2011 |
| Title |
h3k4me2_col_chr4-Analysis of epigenomic changes in hybrids Arabidopsis thaliana Col-0, C24 and Cvi accessions |
| Organism |
Arabidopsis thaliana |
| Experiment type |
Genome variation profiling by genome tiling array
Genome binding/occupancy profiling by genome tiling array
|
| Summary |
a2e_heterosis - h3k4me2_col_chr4 - Arabidopsis thaliana accessions (Col-0, C24 and Cvi) and their hybrid were used to investigate the dynamics of the epigenome after intraspecific hybridization between - H3K4me2 profiling in Col
|
| |
|
| Overall design |
4 dye-swap - chip-chip
|
| Web link |
http://urgv.evry.inra.fr/cgi-bin/projects/CATdb/consult_expce.pl?experiment_id=427
|
| |
|
| Contributor(s) |
Colot V, Roudier F, Martin-Magniette M |
| Citation(s) |
21554454 |
| |
| Submission date |
Nov 01, 2010 |
| Last update date |
Mar 22, 2012 |
| Contact name |
François ROUDIER |
| E-mail(s) |
[email protected]
|
| Organization name |
Ecole Normale Supérieure de Lyon
|
| Department |
Biologie
|
| Lab |
RDP
|
| Street address |
46 Allée d'Italie
|
| City |
Lyon |
| ZIP/Postal code |
69364 |
| Country |
France |
| |
|
| Platforms (1) |
| GPL10772 |
URGV Arabidopsis thaliana CHROMO4_2 array |
|
| Samples (8)
|
| GSM615445 |
1345518-13455540 - H3K4me2_Col_III_INPUT vs H3K4me2_Col_III_IP |
| GSM615446 |
13460815-13455531 - H3K4me2_Col_III_IP vs H3K4me2_Col_III_INPUT |
| GSM615447 |
1345533-13455540 - H3K4me2_Col_IV_INPUT vs H3K4me2_Col_IV_IP |
| GSM615448 |
13460809-13455531 - H3K4me2_Col_IV_IP vs H3K4me2_Col_IV_INPUT |
| GSM615449 |
13455543-13455544 - H3K4me2_Col_I_INPUT vs H3K4me2_Col_I_IP |
| GSM615450 |
13455545-13455534 - H3K4me2_Col_I_IP vs H3K4me2_Col_I_INPUT |
| GSM615451 |
13455893-13455544 - H3K4me2_Col_II_INPUT vs H3K4me2_Col_II_IP |
| GSM615452 |
134555902-13455534 - H3K4me2_Col_II_IP vs H3K4me2_Col_II_INPUT |
|
| This SubSeries is part of SuperSeries: |
| GSE24836 |
Analysis of epigenomic changes in hybrids Arabidopsis thaliana Col-0, C24 and Cvi accessions |
|
| Relations |
| BioProject |
PRJNA134573 |
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