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| Status |
Public on Sep 16, 2023 |
| Title |
Identification of GLYMA.04G093300 and GLYMA.06G314400 binding sites in soybean cotyledon stage embryos. |
| Organism |
Glycine max |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
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| Summary |
To dissect the gene regulatory networks operating during soybean embryo development, we identified the binding sites genome-wide for transcription factor GLYMA.04G093300 and GLYMA.06G314400 in cotyledon stage embryos using ChIP-seq.
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| Overall design |
Identification of GLYMA.04G093300 and and GLYMA.06G314400 binding sites in soybean embryos at the cotyledon stage. ChIP and total chromatin controls (input) were obtained for two biological replicates. A total of 7 samples were sequenced using the Illumina NovaSeq 6000 platform.
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| Contributor(s) |
Pelletier J, Jo L, Uzawa R, Chen M, Golberg RB, Harada JJ |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| |
| Submission date |
Sep 07, 2023 |
| Last update date |
Sep 16, 2023 |
| Contact name |
John Harada |
| E-mail(s) |
[email protected]
|
| Organization name |
University of California
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| Department |
Plant Biology
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| Lab |
Harada lab
|
| Street address |
One Shields Avenue
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| City |
Davis |
| State/province |
CA |
| ZIP/Postal code |
95616 |
| Country |
USA |
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| Platforms (1) |
| GPL28801 |
Illumina NovaSeq 6000 (Glycine max) |
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| Samples (7)
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| Relations |
| BioProject |
PRJNA1013806 |
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