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Series GSE229450 Query DataSets for GSE229450
Status Public on Apr 18, 2023
Title Essential roles of the ANKRD31-REC114 interaction in meiotic recombination and mouse spermatogenesis
Organism Mus musculus
Experiment type Other
Summary DNA double-strand breaks (DSBs) initiate meiotic recombination. ANKRD31 recently emerged as a DSB regulator particularly important in the pseudoautosomal regions (PARs) of sex chromosomes. ANKRD31 interacts with multiple proteins, including DSB-promoting REC114. To test if this interaction is important, we generated mice with Ankrd31 mutations that either reduced (missense) or eliminated (C-terminal truncation) the ANKRD31–REC114 interaction without diminishing contacts with other partners. Eliminating the interaction mimicked an Ankrd31 null, with delayed DSB formation, defective DSB repair, and altered DSB locations including absence of PAR breaks. When the ANKRD31–REC114 interaction was instead attenuated, DSB formation was again delayed globally, but DSB locations and repair were affected little if at all. The missense Ankrd31 allele showed a dosage effect, wherein combining it with the null or C-terminal truncation allele resulted in intermediate phenotypes. Our results show that ANKRD31 function is critically dependent on its interaction with REC114, and that defects in ANKRD31 activity correlate with the severity of interaction disruption.
 
Overall design Detection of single-stranded DNA in the genome of mouse testis cells
 
Contributor(s) Kim S, Xu J, Keeney S
Citation(s) 37162821, 37976262
Submission date Apr 11, 2023
Last update date Dec 08, 2023
Contact name Soonjoung Kim
E-mail(s) [email protected], [email protected]
Organization name Memorial Sloan Kettering Cancer C
Department Molecular Biology
Lab Scott Keeney
Street address 430 East 67th Street
City New York
State/province New York
ZIP/Postal code 10065
Country USA
 
Platforms (2)
GPL19057 Illumina NextSeq 500 (Mus musculus)
GPL30172 NextSeq 2000 (Mus musculus)
Samples (14)
GSM7163838 Exo7T-seq_wt_14dpp_rep1
GSM7163839 Exo7T-seq_wt_14dpp_rep2
GSM7163840 Exo7T-seq_Spo11.null_14dpp_rep1
Relations
BioProject PRJNA954468

Download family Format
SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE229450_RAW.tar 437.1 Mb (http)(custom) TAR (of BW)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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