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Series GSE217188 Query DataSets for GSE217188
Status Public on Jul 18, 2023
Title αKG treatment prevent maturation and stimulate proliferation of neonatal cardiomyocytes
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary In the heart, metabolic profile switches from glycolysis to fatty acid oxidation (FAO) rapidly after birth accompanied by chromatin reconfiguration, cell cycle exit and cardiomyocyte (CM) maturation, suggesting a synergistic rewiring of transcriptional networks regulated by epigenetic mechanisms in accordance with environmental and metabolic signals. To gain a better insight into the interconnection between epigenetic processes and metabolic pathways during cardiac development, maturation and heart regeneration, we induced a metabolic reprogramming by depleting CPT1b, a crucial enzyme for FAO, specifically in CM. Cpt1b inactivation led to cardiomegaly and attenuated cardiac damage in response to myocardial injury primarily attributed to augmented CM proliferation and enhanced resistance to ischemic injury.
 
Overall design Transcriptome profiles of P0-1 neonatal cardiomyocyte treated with DMSO and aKG for 96 hours
 
Contributor(s) Li X, Guenther S, Kuenne C, Braun T
Citation(s) 37758950
Submission date Nov 03, 2022
Last update date Oct 17, 2023
Contact name Carsten Kuenne
E-mail(s) [email protected]
Organization name Max Planck Institute for Heart and Lung Research
Department Bioinformatics
Street address Ludwigstrasse 43
City Bad Nauheim
ZIP/Postal code 61231
Country Germany
 
Platforms (1)
GPL30172 NextSeq 2000 (Mus musculus)
Samples (6)
GSM6706388 CM_DMSO_1
GSM6706389 CM_DMSO_2
GSM6706390 CM_DMSO_3
Relations
BioProject PRJNA897885

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE217188_yua73_rnaseq.txt.gz 753.8 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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