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GEO accession:
Series GSE212825
Query DataSets for GSE212825
Status
Public on Sep 09, 2022
Title
DNA dioxygenases Tet2/3 control epithelial differentiation
Organism
Mus musculus
Experiment type
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
36630508
Submission date
Sep 07, 2022
Last update date
Jan 24, 2023
Contact name
Guodong Chen
E-mail(s)
[email protected]
Organization name
Boston University
Department
Dermatology
Street address
609 Albany Street, ROOM 414
City
BOSTON
State/province
MA
ZIP/Postal code
02118
Country
USA
Platforms (2)
GPL21103
Illumina HiSeq 4000 (Mus musculus)
GPL30172
NextSeq 2000 (Mus musculus)
Samples (33)
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More...
GSM6553038
Wild type RNA replicate 1
GSM6553039
Wild type RNA replicate 2
GSM6553040
Tet2/3 DKO RNA replicate 1
GSM6553041
Tet2/3 DKO RNA replicate 2
GSM6553042
Wild type 5-aza treated RNA replicate 1
GSM6553043
Wild type 5-aza treated RNA replicate 2
GSM6553044
Tet2/3 DKO 5-aza treated RNA replicate 1
GSM6553045
Tet2/3 DKO 5-aza treated RNA replicate 2
GSM6553046
Tet2/3 DKO 5hmC hair matrix P4.5
GSM6553047
Tet2/3 DKO CTCF hair matrix P4.5
GSM6553048
Tet2/3 DKO Dlx3 5-aza treated hair matrix P4.5
GSM6553049
Tet2/3 DKO Dlx3 hair matrix P4.5
GSM6553050
Tet2/3 DKO H3K27ac hair matrix P4.5
GSM6553051
Tet2/3 DKO H3K27me3 hair matrix P4.5
GSM6553052
Tet2/3 DKO H3K4me1 hair matrix P4.5
GSM6553053
Tet2/3 DKO H3K4me3 hair matrix P4.5
GSM6553054
Tet2/3 DKO Lef1 5-aza treated hair matrix P4.5
GSM6553055
Tet2/3 DKO Lef1 hair matrix P4.5
GSM6553056
Tet2/3 DKO Pol2Ser5 5-aza treated hair matrix P4.5
GSM6553057
Tet2/3 DKO Pol2Ser5 hair matrix P4.5
GSM6553058
Wild type 5hmC hair matrix P4.5
GSM6553059
Wild type CTCF hair matrix P4.5
GSM6553060
Wild type Dlx3 5-aza treated hair matrix P4.5
GSM6553061
Wild type Dlx3 hair matrix P4.5
GSM6553062
Wild type H3K27ac hair matrix P4.5
GSM6553063
Wild type H3K27me3 hair matrix P4.5
GSM6553064
Wild type H3K4me1 hair matrix P4.5
GSM6553065
Wild type H3K4me3 hair matrix P4.5
GSM6553066
Wild type IgG hair matrix P4.5
GSM6553067
Wild type Lef1 5-aza treated hair matrix P4.5
GSM6553068
Wild type Lef1 hair matrix P4.5
GSM6553069
Wild type Pol2Ser5 5-aza treated hair matrix P4.5
GSM6553070
Wild type Pol2Ser5 hair matrix P4.5
This SuperSeries is composed of the following SubSeries:
GSE212823
DNA dioxygenases Tet2/3 control epithelial differentiation [RNA-seq]
GSE212824
DNA dioxygenases Tet2/3 control epithelial differentiation [CUT&TAG]
Relations
BioProject
PRJNA877566
Download family
Format
SOFT formatted family file(s)
SOFT
MINiML formatted family file(s)
MINiML
Series Matrix File(s)
TXT
Supplementary file
Size
Download
File type/resource
GSE212825_RAW.tar
1.3 Gb
(http)
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