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Series GSE212549 Query DataSets for GSE212549
Status Public on Dec 31, 2023
Title Expression profiling in R/M HNSCC treated with immunotherapy (training set)
Organism Homo sapiens
Experiment type Expression profiling by array
Summary In recurrent/metastatic (RM) head and neck squamous cell cancer (HNSCC) not amenable to salvage surgery or radiation, the overall survival remains unsatisfactory, and the patients often experience a huge burden of symptoms requiring treatments that could achieve objective response on the disease itself. Recently, treatment with immune checkpoint inhibitors (ICI) has shown survival benefit in randomized clinical trials both in the setting of platinum pre-treated patients and in patients at their first line of treatment, with the expression of PDL1 on the tumor. Despite the introduction of ICI, only a small subset of RM HNSCC patients achieves long-term survivorship. We aim at identifying predictors of outcome and evaluating a gene expression signature (Cl6-immunereactive) in patients treated with ICI therapy. Our data highlight the presence of biological underlying differences able to predict outcome following treatment with ICI for platinum-refractory RM-HNSCC.
 
Overall design This was a translational research on a single-arm, open-label, multicenter, phase IIIb clinical trial (NIVACTOR) in patients with Recurrent or Metastatic (RM) platinum-refractoy HNSCC treated with nivolumab (EudraCT Number: 2017-000562-30). The NIVACTOR study enrolled 127 R/M HNSCC patients to fulfill both clinical and translational endpoints. Whole transcriptome RNA profiling was feasible on 80 FFPE tissue specimens. There are no significant differences between the whole cohort and the subset used for the gene-expression profiling in terms of their gender, age, PS, smoking, primary tumor site, stage, site of metastatis, PDL1 status (TPS or CPS).
 
Contributor(s) De Cecco L
Citation(s) 38290766
Submission date Sep 01, 2022
Last update date Feb 14, 2024
Contact name Loris De Cecco
E-mail(s) [email protected]
Organization name IRCSS Istituto Nazionale Tumori
Street address via Venezian 1
City Milan
ZIP/Postal code 20133
Country Italy
 
Platforms (1)
GPL23126 [Clariom_D_Human] Affymetrix Human Clariom D Assay [transcript (gene) version]
Samples (80)
GSM6534525 HNC001_TrainingSet
GSM6534527 HNC002_TrainingSet
GSM6534528 HNC003_TrainingSet
This SubSeries is part of SuperSeries:
GSE212551 Expression profiling in R/M HNSCC treated with immunotherapy
Relations
BioProject PRJNA875946

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE212549_RAW.tar 1.8 Gb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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