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Series GSE207381 Query DataSets for GSE207381
Status Public on Jul 08, 2022
Title Evaluation of the synergistic potential of simultaneous pan- or isoform specific BET and SYK inhibition in B-cell lymphoma (microarray)
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Background: Bromodomain and extra-terminal domain (BET) proteins and the spleen tyrosine kinase (SYK) represent promising targets in Diffuse large B-cell (DLBCL) and Burkitt’s lymphoma (BL). We evaluated the anti-lymphoma activity of the isoform specific bivalent BET inhibitor AZD5153 (AZD) and the pan-BET inhibitor I-BET151 (I-BET) as single agents and in combination with SYK inhibitor Entospletinib in vitro. Methods: Single agent exposures were evaluated on two DLBCL and two BL cell lines analyzing cell proliferation and metabolic activity. Proliferation, metabolic activity, apoptosis, cell cycle and morphology were investigated after combined AZD or I-BET and Ento exposure. RNAseq of combined AZD+Ento exposure was characterized in SU-DHL-4. Background: Bromodomain and extra-terminal domain (BET) proteins and the spleen tyrosine kinase (SYK) represent promising targets in Diffuse large B-cell (DLBCL) and Burkitt’s lymphoma (BL). We evaluated the anti-lymphoma activity of the isoform specific bivalent BET inhibitor AZD5153 (AZD) and the pan-BET inhibitor I-BET151 (I-BET) as single agents and in combination with SYK inhibitor Entospletinib in vitro. Methods: Single agent exposures were evaluated on two DLBCL and two BL cell lines analyzing cell proliferation and metabolic activity. Proliferation, metabolic activity, apoptosis, cell cycle and morphology were investigated after combined AZD or I-BET and Ento exposure. RNAseq of combined AZD+Ento exposure was characterized in SU-DHL-4.
Results: Both BET inhibitors reduced cell proliferation/metabolic activity dose and time de-pendently. Combined BET and SYK inhibition enhanced the anti-proliferative effect and induc-ing a G0/G1 cell cycle arrest. SU-DHL-4 demonstrated a pronounced modulation of gene expres-sion by AZD, which was markedly increased by additional SYK inhibition. Functional enrich-ment analyses identified combination-specific GO terms related to cell division, transport and DNA replication. Genes such as PLEKHH3, MYB, SLC8A1, PARP9, HSPB1 and S100A4 were iden-tified as the presumable key regulators. Conclusion: Simultaneous inhibition of BET and SYK enhanced the anti-proliferative effects, and especially the combination-specific gene expression signature.
 
Overall design Comparative expression analyses of AZD+Ento exposed SU-DHL-4 and DG-75 cells compared to DMSO control and AZD or Ento single agents; all sample measured in three biological triplicates
 
Contributor(s) Sender S, Sultan AW, Palmer D, Koczan D, Sekora A, Beck J, Schuetz E, Brenig B, Fuellen G, Junghanss C, Escobar HM
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Submission date Jul 01, 2022
Last update date Aug 31, 2022
Contact name Sina Sender
E-mail(s) [email protected]
Organization name Rostock University Medical Center
Department Department of Medicine, Clinic III
Lab Hematology/Oncology
Street address Schillingallee 70
City Rostock
State/province Mecklenburg Vorpommern
ZIP/Postal code 18059
Country Germany
 
Platforms (1)
GPL23126 [Clariom_D_Human] Affymetrix Human Clariom D Assay [transcript (gene) version]
Samples (24)
GSM6285243 DG-75 DMSO N1
GSM6285244 DG-75 Ento N1
GSM6285245 DG-75 AZD N1
This SubSeries is part of SuperSeries:
GSE207383 Evaluation of the synergistic potential of simultaneous pan- or isoform specific BET and SYK inhibition in B-cell lymphoma
Relations
BioProject PRJNA854955

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE207381_RAW.tar 577.7 Mb (http)(custom) TAR (of CEL, CHP)
GSE207381_microarray_data.txt.gz 3.4 Mb (ftp)(http) TXT
Processed data included within Sample table
Processed data provided as supplementary file

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