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| Status |
Public on Nov 01, 2022 |
| Title |
Chromatin Accessibility Profiling of Osteoclasts Precursor Cells |
| Organism |
Homo sapiens |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
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| Summary |
To understand the pathogenic mechanisms of bone erosion in rheumatoid arthritis (RA), we investigated osteoclast-specific epigenetic programs, RANKL-responsive super-enhancers (SEs) and SE-associated enhancer RNAs (SE-eRNAs) in human osteoclasts.
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| Overall design |
ATAC-seq
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| Contributor(s) |
Bae S, Kim K, Park-Min K, Park S |
| Citation(s) |
36513810, 38562830 |
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| Submission date |
May 19, 2022 |
| Last update date |
Apr 17, 2024 |
| Contact name |
Kibyeong Kim |
| Organization name |
Yonsei University
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| Street address |
50-1, Yonsei-ro, Seodaemun-gu
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| City |
Seoul |
| ZIP/Postal code |
03722 |
| Country |
South Korea |
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| Platforms (1) |
| GPL16791 |
Illumina HiSeq 2500 (Homo sapiens) |
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| Samples (6)
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| This SubSeries is part of SuperSeries: |
| GSE203587 |
Epigenetic and Transcriptomic Profiling in Developing Osteoclasts |
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| Relations |
| BioProject |
PRJNA839624 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE203354_RAW.tar |
17.2 Mb |
(http)(custom) |
TAR (of TXT) |
SRA Run Selector |
| Raw data are available in SRA |
| Processed data provided as supplementary file |
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