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Series GSE198038 Query DataSets for GSE198038
Status Public on Dec 19, 2023
Title Vascular endothelial cells drive organ fibrosis by inducing the transcription factor Sox9 (bulk RNA-Seq IV)
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Chronic fibrosis is a hallmark of pathologic tissue remodelling that deteriorates organ function and eventually leads to death. Although fibroblasts are typically made responsible, it was recently suggested that endothelial cells contribute to fibrosis, although the functional importance of this phenomenon remained unclear. In this study, we addressed this question by genetic manipulation of the fibrogenic HMG-box transcription factor SOX9 specifically in vascular endothelial cells. Induced transgenic overexpression of SOX9 in these cells in mice triggered extensive fibrosis, organ growth and dysfunction in the heart, lung, liver and spleen. We found an upregulation of endogenous Sox9 in endothelial cells during cardiac, lung and liver fibrosis, and endothelial specific Sox9 deletion prevented fibrosis and organ dysfunction in mouse models of systolic and diastolic heart failure, as well as in mouse bleomycin induced pulmonary and non-alcoholic steato-hepatitis (NASH) triggered liver fibrosis. Mechanistically, a combined approach of bulk and single cell RNA sequencing of endothelial cells across multiple vascular beds revealed that Sox9 promoted the expression of extracellular matrix and matrix remodelling genes, growth factors, and inflammatory mediators, which triggered the expression of extracellular matrix directly by endothelial cells, but also activated fibroblasts. As we found the upregulation of endothelial Sox9 also in failing human hearts, we propose that endothelial Sox9 could be a target for anti-fibrotic therapy.
 
Overall design Liver EC lysates from mice with CDAA diet after endothelial Sox9 knock-out
 
Contributor(s) Trogisch FA, Cordero J, Keles M, Heineke J
Citation(s) 38416842
Submission date Mar 07, 2022
Last update date Mar 05, 2024
Contact name Joerg Heineke
E-mail(s) [email protected]
Organization name Medizinische Fakultät Mannheim
Department – Department of Cardiovascular Research (HKF)
Street address Ludolf-Krehl-Str. 7-11
City Mannheim
State/province Baden Wuttemberg
ZIP/Postal code 68167
Country Germany
 
Platforms (1)
GPL23479 BGISEQ-500 (Mus musculus)
Samples (12)
GSM5936405 Liver_EC_KO_CDAA_rep1.fastq.gz
GSM5936406 Liver_EC_KO_CDAA_rep2.fastq.gz
GSM5936407 Liver_EC_KO_CDAA_rep3.fastq.gz
This SubSeries is part of SuperSeries:
GSE198041 Vascular endothelial cells drive organ fibrosis by inducing the transcription factor Sox9
Relations
BioProject PRJNA813506

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE198038_001_Sox9_KO_Liver_EC_Chow_vs_CDAA_Deseq2_Diff_Expre.xlsx 10.8 Mb (ftp)(http) XLSX
GSE198038_002_Sox9_WT_Liver_EC_Chow_vs_CDAA_Deseq2_Diff_Expre.xlsx 11.0 Mb (ftp)(http) XLSX
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Raw data are available in SRA
Processed data are available on Series record

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