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Series GSE191114 Query DataSets for GSE191114
Status Public on Dec 18, 2021
Title Transcriptomics and network analysis highlight potential pathways in the pathogenesis of pterygium
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Differential expression comparing active pterygium with atrophic pterygium using data generated from the Brazilian cohort identified differentially expressed genes between the two forms of presentation of this condition
 
Overall design Samples from nine patients were collected during surgery after photo documentation and clinical characterization of pterygia. Gene expression experiments were performed using Human Clariom D Assay gene chip. Differential gene expression analysis between active and atrophic pterygia was performed using limma package after adjusting variables by age.
Web link https://www.nature.com/articles/s41598-021-04248-x
 
Contributor(s) de Guimarães JA, Hounpke BW, Duarte B, Boso AL, Viturino MG, de Carvalho Baptista L, de Melo MB, Alves M
Citation(s) 34997134
Submission date Dec 17, 2021
Last update date Jan 10, 2022
Contact name Juliana Albano de Guimarães
Organization name School of Medical Sciences of University of Campinas
Department Ophthalmology
Street address Tessália Vieira de Camargo, 126, Cidade Universitária
City Campinas
State/province SP
ZIP/Postal code 13083-887
Country Brazil
 
Platforms (1)
GPL23126 [Clariom_D_Human] Affymetrix Human Clariom D Assay [transcript (gene) version]
Samples (9)
GSM5739348 active, UNICAMP 5
GSM5739349 atrophic, UNICAMP 6
GSM5739350 active, UNICAMP 8
Relations
BioProject PRJNA789792

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE191114_RAW.tar 196.3 Mb (http)(custom) TAR (of CEL)
GSE191114_differentially-regulated.xlsx 42.9 Kb (ftp)(http) XLSX
Processed data included within Sample table
Processed data are available on Series record

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