|
| Status |
Public on Nov 18, 2009 |
| Title |
Effect of the explosive compound TNT on wild type seedlings |
| Organism |
Arabidopsis thaliana |
| Experiment type |
Expression profiling by array
|
| Summary |
The aim of this experiment was to identify the genes involved in the detoxification of the toxic pollutant and explosive compound 2,4,6-trinitrotolune (TNT). Fourteen-day-old, liquid culture grown, Arabidopsis seedlings, ecotype Col0 (NASC stock code N1093), were dosed with 60 uM TNT dissolved in 60 ul dimethyl formamide (DMF) solvent, or 60 ul DMF only. After six hours, RNA was extracted and used for the microarray analysis. Further details and characterisation of glucosyltransferases identified using this method are presented in citation below.
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| |
|
| Overall design |
6 samples were used in this experiment
|
| |
|
| Contributor(s) |
Rylott E |
| Citation(s) |
18702669 |
| |
| Submission date |
Nov 12, 2009 |
| Last update date |
Jun 12, 2017 |
| Contact name |
Nottingham Arabidopsis Stock Centre (NASC) |
| E-mail(s) |
[email protected]
|
| Phone |
+44 (0)115 951 3237
|
| Fax |
+44 (0)115 951 3297
|
| URL |
http://arabidopsis.info/
|
| Organization name |
Nottingham Arabidopsis Stock Centre (NASC)
|
| Department |
School of Biosciences, University of Nottingham
|
| Street address |
Sutton Bonington Campus
|
| City |
Loughborough |
| ZIP/Postal code |
LE12 5RD |
| Country |
United Kingdom |
| |
|
| Platforms (1) |
| GPL198 |
[ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array |
|
| Samples (6)
|
| GSM469811 |
Rylott_1-4_DMF-treated-control-seedlings_Rep1_ATH1 |
| GSM469812 |
Rylott_1-3_TNT-treated-seedlings_Rep3_ATH1 |
| GSM469813 |
Rylott_1-2_TNT-treated-seedlings_Rep2_ATH1 |
| GSM469814 |
Rylott_1-1_TNT-treated-seedlings |
| GSM469815 |
Rylott_1-5_DMF-treated-control-seedlings_Rep2_ATH1 |
| GSM469816 |
Rylott_1-6_DMF-treated-control-seedlings_Rep3_ATH1 |
|
| Relations |
| BioProject |
PRJNA120975 |
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