NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE185846 Query DataSets for GSE185846
Status Public on Feb 16, 2022
Title mRAN expression profiles in bone marrow mesenchymal stem cells (MSC) from Wild Type and Lama4-deficient mice co-cultured with MLL-AF9 AML cells
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Bone marrow (BM) niche contributes to hematopoietic regeneration and can be remodeled by leukemic cells. We have found that Lama4 deletion in mouse mesenchymal stem cells (MSCs) could promote the proliferation of MLL-AF9 acute myeloid leukemia (AML) cells and chemoresistance of the cells to chemotherapy cytarabine. However, whether Lama4 deficient MSCs are more susseptible for AML cell remodeling remains to be explored. Here we report that differential molecular alterations in Lama4 deficient MSCs compared to wild type MSCs after being exposed to the AML cells for 48hours, which might be related to the enhanced AML cell proliferation and chemoresistance.
 
Overall design Examination of mRNA profiles in mesenchymal stem cells (CD45-TER119-CD31-CD44-CD51+SCA1+) from Wild Type and Lama4-deficient mice co-cultured with MLL-AF9 AML cells
 
Contributor(s) Qian H, Kondo M, Cai H, Sandhow L, Xiao P, Johansson A, Sasaki T, Tryggvarson K, Ekblom M
Citation(s) 34958665
Submission date Oct 13, 2021
Last update date Feb 16, 2022
Contact name Hong Qian
E-mail(s) [email protected]
Organization name Karolinska Institute
Department Department of Medicine
Lab Hong Qian Group
Street address Hälsovägen 7C (lastkaj), 14157 Huddinge/Stockholm
City Stockholm
ZIP/Postal code 171 77
Country Sweden
 
Platforms (1)
GPL30172 NextSeq 2000 (Mus musculus)
Samples (22)
GSM5624587 WT_MSC_REP1
GSM5624588 WT_MSC_REP2
GSM5624589 WT_MSC_REP3
Relations
BioProject PRJNA770993
SRA SRP341220

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE185846_Gene_counts_matrix.xlsx 18.7 Mb (ftp)(http) XLSX
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap