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Series GSE181405 Query DataSets for GSE181405
Status Public on Aug 30, 2021
Title These data describe bulk RNAsequencing in wild-type cerbreal organoids sampled across a time series
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Organoid transcriptomes were mapped onto brain development trajectories using bulk RNA sequencing (RNAseq) at seven successive developmental times from day-17 (2 weeks) today-158 (11 weeks)
 
Overall design Bulk RNA sequencing was performed in wild-type cerebral organoids grown in vitro or 17-158 days. Three biological replicates were employes at ea ch timepoint, and randomization was performed in advance of library preparations.
 
Contributor(s) Cruceanu C, Bider E, Roeh S
Citation(s) 34728600
Submission date Aug 03, 2021
Last update date Dec 02, 2021
Contact name Elisabeth B Binder
Organization name Max Planck Institute of Psychiatry
Street address Kraepelinstr. 2-10
City Munich
ZIP/Postal code 80804
Country Germany
 
Platforms (1)
GPL20301 Illumina HiSeq 4000 (Homo sapiens)
Samples (21)
GSM5501779 Organoid_day_17_rep1
GSM5501780 Organoid_day_17_rep2
GSM5501781 Organoid_day_17_rep3
Relations
BioProject PRJNA751896
SRA SRP331030

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE181405_RAW.tar 5.9 Mb (http)(custom) TAR (of CSV)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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