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GEO accession:
Series GSE179694
Query DataSets for GSE179694
Status
Public on Jul 14, 2021
Title
NUT Carcinoma
Organism
Homo sapiens
Experiment type
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
34285087
Submission date
Jul 07, 2021
Last update date
Oct 19, 2021
Contact name
Hitoshi Shiota
E-mail(s)
[email protected]
Phone
6175254855
Organization name
Brigham and Women's Hospital
Street address
77 Avenue Louis Pasteur, NRB rm652
City
Boston
State/province
Massachusetts
ZIP/Postal code
02115
Country
USA
Platforms (2)
GPL18573
Illumina NextSeq 500 (Homo sapiens)
GPL24676
Illumina NovaSeq 6000 (Homo sapiens)
Samples (32)
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GSM5428829
ChIP_B4N_797_DMSO_rep1_Nov2020
GSM5428830
ChIP_H3K27ac_797_DMSO_rep1_Nov2020
GSM5428831
Input_B4N_797_DMSO_rep1_Nov2020
GSM5428832
Input_H3K27ac_797_DMSO_rep1_Nov2020
GSM5428833
ChIP_B4N_797_Pano_rep1_Nov2020
GSM5428834
ChIP_H3K27ac_797_Pano_rep1_Nov2020
GSM5428835
Input_B4N_797_Pano_rep1_Nov2020
GSM5428836
Input_H3K27ac_797_Pano_rep1_Nov2020
GSM5428837
ChIP_B4N_797_DMSO_rep2_Nov2020
GSM5428838
ChIP_H3K27ac_797_DMSO_rep2_Nov2020
GSM5428839
Input_B4N_797_DMSO_rep2_Nov2020
GSM5428840
Input_H3K27ac_797_DMSO_rep2_Nov2020
GSM5428841
ChIP_B4N_797_Pano_rep2_Nov2020
GSM5428842
ChIP_H3K27ac_797_Pano_rep2_Nov2020
GSM5428843
Input_B4N_797_Pano_rep2_Nov2020
GSM5428844
Input_H3K27ac_797_Pano_rep2_Nov2020
GSM5428873
RNA_10-15_DMSO_rep1_July2020
GSM5428874
RNA_TC-797_DMSO_rep1_July2020
GSM5428875
RNA_10-15_DMSO_rep2_July2020
GSM5428876
RNA_TC-797_DMSO_rep2_July2020
GSM5428877
RNA_10-15_Pano_rep1_July2020
GSM5428878
RNA_TC-797_Pano_rep1_July2020
GSM5428879
RNA_10-15_Pano_rep2_July2020
GSM5428880
RNA_TC-797_Pano_rep2_July2020
GSM5428881
10-15_1_DMSO_4h_Aug2019
GSM5428882
10-15_2_DMSO_4h_Aug2019
GSM5428883
TC-797_1_DMSO_4h_Aug2019
GSM5428884
TC-797_2_DMSO_4h_Aug2019
GSM5428885
10-15_1_IRBM6_200nM_4h_Aug2019
GSM5428886
10-15_2_IRBM6_200nM_4h_Aug2019
GSM5428887
TC-797_1_IRBM6_200nM_4h_Aug2019
GSM5428888
TC-797_2_IRBM6_200nM_4h_Aug2019
This SuperSeries is composed of the following SubSeries:
GSE179692
ChIP-seq analysis of BRD4-NUT and H3K27ac distribution in NUT Carcinoma cell line TC-797 treated with DMSO or Panobinostat
GSE179693
RNA-seq on NUT Carcinoma (NC) cell lines treated with DMSO, Panobinostat or IRBM6
Relations
BioProject
PRJNA744550
Download family
Format
SOFT formatted family file(s)
SOFT
MINiML formatted family file(s)
MINiML
Series Matrix File(s)
TXT
Supplementary file
Size
Download
File type/resource
GSE179694_RAW.tar
5.3 Mb
(http)
(custom)
TAR (of NARROWPEAK)
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