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Series GSE177481 Query DataSets for GSE177481
Status Public on Oct 27, 2021
Title Chromatin remodeler Brahma safeguards canalization in cardiac mesoderm differentiation [ChIP-seq]
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary We used antibody against REST protein (Sigma, 17-10456) to chromatin IP REST at D4 and D6 of cardiac differentiation from WT and BRM KO cells.
 
Overall design REST ChIPseq were performed in WT and BRM KO cells during D4 and D6 stages of cardiac differentiation
 
Contributor(s) Bruneau BG, Hota S
Citation(s) 35082446
Submission date Jun 12, 2021
Last update date Feb 04, 2022
Contact name Benoit Bruneau
E-mail(s) [email protected]
Organization name Gladstone Institute of Cardiovascular Disease
Street address 1650 Owens Street
City San Francisco
State/province CA
ZIP/Postal code 94158
Country USA
 
Platforms (1)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (8)
GSM5374912 D4_WT_Input
GSM5374913 D4_WT_REST_ChIPseq
GSM5374914 D4_BRMKO_Input
This SubSeries is part of SuperSeries:
GSE150186 Brahma safeguards canalization of cardiac mesoderm differentiation
Relations
BioProject PRJNA737111
SRA SRP323817

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE177481_RAW.tar 930.1 Mb (http)(custom) TAR (of BIGWIG)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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