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Series GSE171988 Query DataSets for GSE171988
Status Public on Apr 26, 2023
Title Alternative splicing and gene expression defects in motorneurons derived from DM1 hiPSCs and MBNL knockouts hiPSCs generated by CRISPR/Cas9.
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Myotonic dystrophy type I (DM1) is the most frequent neuromuscular disease (NMD) in adults and only symptomatic treatments have been proposed to patients. DM1 has long been defined by muscular defects but several studies suggested the involvement of the neuromuscular junction (NMJ). In this aim, our purpose raised the question about the pathological contribution of the motoneurons (MNs) in DM1 physiopathology. By using a micropatterned 96-well plate as a co-culture platform, we generated a functional humanized system in 11 days which associates hiPS-derived MNs and human primary skeletal muscle cells. To focus only on DM1 motoneurons-dependent phenotypes, we generated hybrid systems using wild-type skeletal muscle cells combined with mutated hiPS-derived MNs. In this context, we have identified several alterations affecting synaptic vesicular trafficking, AChR clustering and communication between pre- and post-synaptic compartments. More interestingly, hiPS-derived MNs depleted for MBNL1 and MBNL2 reproduced alterations at the pre- and post-synaptic levels. These experiments suggested that the functional defects associated to MNs can be directly attributed to the MBNL family proteins. These findings may be clinically relevant to open new therapeutic approaches taking into account the alterations affecting DM1 motoneurons.
 
Overall design 12 samples were analyzed with 3 replicates per condition: 3 WT hiPSC-derived motorneurones (control), 3 Myotonic Dystrophy type 1 (DM1) hiPSC-derived motorneurones, 3 MBNL2(-/-) hiPSC-derived motorneurones and 3 MBNL1(-/-); MBNL2(-/-) (DKO) hiPSC-derived motorneurones.
 
Contributor(s) Tahraoui-Bories J, Martinat C, Mérien A, Jarrige M, Polvèche H
Citation(s) 36575942
Submission date Apr 13, 2021
Last update date Apr 26, 2023
Contact name MARGOT JARRIGE
E-mail(s) [email protected]
Phone +33169908529
Organization name I-Stem/INSERM U861
Street address 28, Rue Henri Desbruères
City Corbeil-Essonnes
ZIP/Postal code 91100
Country France
 
Platforms (1)
GPL21697 NextSeq 550 (Homo sapiens)
Samples (12)
GSM5239412 WT_1
GSM5239413 WT_2
GSM5239414 WT_3
Relations
BioProject PRJNA721621
SRA SRP314650

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Supplementary file Size Download File type/resource
GSE171988_Tahraoui_Bories_2021_readscounts_raw.txt.gz 537.6 Kb (ftp)(http) TXT
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Processed data are available on Series record

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