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Series GSE166408 Query DataSets for GSE166408
Status Public on Jan 25, 2022
Title Testing conditions for ribosome profiling in Drosophila melanogaster
Organism Drosophila melanogaster
Experiment type Other
Summary Comparison of experimental conditions for ribosome profiling.
 
Overall design Ribo-seq of Drosophila melanogaster S2 cells from 4 different conditions: untreated or treated with cycloheximide, each undergoing two different RNase I footprinting conditions.
 
Contributor(s) Agapiou M, Aspden J, Birds I
Citation(s) 35145996
Submission date Feb 09, 2021
Last update date Feb 14, 2022
Contact name Julie Aspden
Organization name University of Leeds
Department FBS
Street address Woodhouse
City Leeds
ZIP/Postal code LS2 9JT
Country United Kingdom
 
Platforms (1)
GPL19132 Illumina NextSeq 500 (Drosophila melanogaster)
Samples (5)
GSM5070732 S2_TA_Ribo-seq
GSM5070733 S2_TD_Ribo-seq
GSM5070734 S2_UTA_Ribo-seq
Relations
BioProject PRJNA700841
SRA SRP305462

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE166408_RAW.tar 2.0 Mb (http)(custom) TAR (of BED)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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