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| Status |
Public on Oct 29, 2021 |
| Title |
SAGA core module subunits regulate gene expression during oogenesis [ChIP-seq] |
| Organism |
Drosophila melanogaster |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
ChIP-nexus performed in Kc167 cells for subunits of the SAGA coactivator complex;ChIP performed in ovary homogenate for subunits of the SAGA coactivator complex
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| Overall design |
Genome-wide binding profiles ofhte SAGA complex were establised in cells and ovary tissue using ChIP-nexus and reguar ChIP by chromatin immunoprecipitating Ada2b, Spt3, SAF6 and WDA, and Sgf11
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| |
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| Contributor(s) |
Soffers JH, Alcantara SG, Li H, Seidel CW, Zeitlinger J, Workman JL |
| Citation(s) |
34807910 |
| |
| Submission date |
Feb 04, 2021 |
| Last update date |
Jan 28, 2022 |
| Contact name |
Hua Li |
| E-mail(s) |
[email protected]
|
| Organization name |
Stowers Institute for Medical Research
|
| Street address |
1000 E 50th Street
|
| City |
Kansas City |
| State/province |
MO |
| ZIP/Postal code |
64110 |
| Country |
USA |
| |
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| Platforms (2) |
| GPL17275 |
Illumina HiSeq 2500 (Drosophila melanogaster) |
| GPL19132 |
Illumina NextSeq 500 (Drosophila melanogaster) |
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| Samples (20)
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| Relations |
| BioProject |
PRJNA699611 |
| SRA |
SRP304790 |
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