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Series GSE165408 Query DataSets for GSE165408
Status Public on Mar 02, 2022
Title Addition of retinoic acid to kidney organoids
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary The addition of 5uM retinoic acid to kidney organoids at day 12 (day 7+5). This data is from the same experimental batch as data within GSE119561.
 
Overall design Single-cell RNA-seq generated on a 10x Chromium genomics platform from iPSC-derived human kidney organoids. Each sample represents 6 pooled organoids derived from a single well of a transwell plate, generated from individual iPSC-derived reporter lines and harvested at either Day 18 (D18) or Day 25 (D25) of the differentiation protocol.
 
Contributor(s) Wilson S, Vanslambrouck J, Howden S, Little M
Citation(s) 35189942
Submission date Jan 24, 2021
Last update date Mar 03, 2022
Contact name Sean Wilson
E-mail(s) [email protected]
Organization name MCRI
Street address 50 Flemington Road
City Parkville
State/province Victoria
ZIP/Postal code 3065
Country Australia
 
Platforms (1)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
Samples (1)
GSM5032947 D25 organoid with RA
Relations
BioProject PRJNA694466
SRA SRP303068

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE165408_RAW.tar 18.3 Mb (http)(custom) TAR (of MTX, TSV)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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