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Series GSE165254 Query DataSets for GSE165254
Status Public on May 25, 2021
Title Distinct transcriptional profile of blood mononuclear cells in Behcet’s disease: insights into the central role of neutrophil chemotaxis
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Both innate and adaptive immune responses are reportedly increased in Behcet’s disease (BD), a chronic-relapsing systemic vasculitis lying at the intersection between autoinflammation and autoimmunity. To further study pathophysiologic molecular mechanisms operating in BD we searched for transcriptome-wide changes in blood mononuclear cells from these patients. We performed 3’ mRNA next generation sequencing-based genome-wide transcriptional profiling followed by analysis of differential expression signatures, KEGG pathways, GO biological processes and transcription factor signatures al 25 samples (11 healthy controls and 14 BD).
 
Overall design 25 human samples out of with 11 healthy controls and 14 with Behcet’s disease
 
Contributor(s) Verrou K, Vlachogiannis NI, Ampatziadis-Michailidis G, Moulos P, Pavlopoulos GA, Hatzis P, Kollias G, Sfikakis PP
Citation(s) 33493315
Submission date Jan 21, 2021
Last update date May 25, 2021
Contact name Maria G. Tektonidou
E-mail(s) [email protected]
Organization name National and Kapodistrian University of Athens
Street address Mikras Asias 75
City Athens
State/province Please choose a State
ZIP/Postal code 11527
Country Greece
 
Platforms (1)
GPL21697 NextSeq 550 (Homo sapiens)
Samples (25)
GSM5028902 HC1
GSM5028903 HC2
GSM5028904 HC3
Relations
BioProject PRJNA693819
SRA SRP302704

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Supplementary file Size Download File type/resource
GSE165254_RAW.tar 381.8 Mb (http)(custom) TAR (of BIGWIG)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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