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Series GSE161422 Query DataSets for GSE161422
Status Public on Apr 21, 2021
Title Divergent resistance mechanisms to HER2-targeted therapies in breast cancer (scRNA-Seq)
Organisms Homo sapiens; Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Divergent resistance mechanisms to HER2-targeted therapies in breast cancer
 
Overall design scRNA-Seq of two HER2+ PDX models treated with chemotherapy or HER2-targeting agents
 
Contributor(s) Janiszewska M, Stein S, Michor F, Polyak K
Citation(s) 33886505
Submission date Nov 13, 2020
Last update date Jul 20, 2021
Contact name Kornelia Polyak
E-mail(s) [email protected]
Phone 617-632-2106
Organization name Dana-Farber Cancer Institute
Department Medical Oncology
Lab Polyak
Street address 450 Brookline Ave
City Boston
State/province MA
ZIP/Postal code 02215
Country USA
 
Platforms (1)
GPL19415 Illumina NextSeq 500 (Homo sapiens; Mus musculus)
Samples (4)
GSM4906841 hert1_batch1
GSM4906842 hert2_batch1
GSM4906843 hert1_batch2
This SubSeries is part of SuperSeries:
GSE161423 Divergent resistance mechanisms to HER2-targeted therapies in breast cancer
Relations
BioProject PRJNA678283
SRA SRP292491

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE161422_HERT1_1_raw_gene_bc_matrices_h5.h5 37.4 Mb (ftp)(http) H5
GSE161422_HERT1_2_raw_feature_bc_matrix.h5 130.6 Mb (ftp)(http) H5
GSE161422_HERT2_1_raw_gene_bc_matrices_h5.h5 64.7 Mb (ftp)(http) H5
GSE161422_HERT2_2_raw_feature_bc_matrix.h5 139.9 Mb (ftp)(http) H5
GSE161422_RAW.tar 50.4 Mb (http)(custom) TAR (of CSV)
GSE161422_scRNAseq_merged_sample_description.csv.gz 360 b (ftp)(http) CSV
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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