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Series GSE159855 Query DataSets for GSE159855
Status Public on Oct 22, 2020
Title Comprehensive analysis of metabolic and mitochondrial characteristics of extraembryonic endoderm cells
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary The purpose of the study was to identify transcriptomic changes between feeder-free ES and XEN cells. ES cells were cultured feeder-free on 0.1% gelatin in 2iLIF in N2B27 media. XEN cells were also cultured feeder-free on 0.1% gelaton in RPMI1640 supplemented with 15% FBS, 2mM GlutaMAX and BME.
 
Overall design Bulk RNAseq of feeder-free ES and XEN cells under normal conditions
 
Contributor(s) Gatie MI, Kelly GM
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Submission date Oct 22, 2020
Last update date Oct 26, 2020
Contact name Mohamed I Gatie
E-mail(s) [email protected]
Phone 2262358553
Organization name University of Western Ontario
Department Biology
Street address 1151 Richmond street, Chemistry Building Room 003, Dock 11
City London
State/province Ontario
ZIP/Postal code N6A5B7
Country Canada
 
Platforms (1)
GPL23479 BGISEQ-500 (Mus musculus)
Samples (6)
GSM4848801 ES_A
GSM4848802 ES_B
GSM4848803 ES_C
Relations
BioProject PRJNA670688
SRA SRP288341

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE159855_RAW.tar 14.1 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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