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Series GSE159552 Query DataSets for GSE159552
Status Public on Jan 01, 2021
Title ULI-NChIP-seq Analysis of Wild Type(WT) and Dcaf11 overexpresion(OE) ESCs [ChIP-seq]
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary Our study demonstrates that Dcaf11 plays important roles in telomere elongation in early embryos and ESCs through activating Zscan4.
 
Overall design ESC histone profiles of WT and Dcaf11 OEs were generated by deep sequencing, using Illumina GAIIx.
 
Contributor(s) Le R, Huang Y, Zhang Y
Citation(s) 33357405
Submission date Oct 19, 2020
Last update date Apr 12, 2021
Contact name Yixin Huang
E-mail(s) [email protected]
Organization name Tongji University
Street address Siping Road
City Shanghai
ZIP/Postal code 200092
Country China
 
Platforms (1)
GPL11002 Illumina Genome Analyzer IIx (Mus musculus)
Samples (6)
GSM4832448 WT_embryonic stem cells - H3K9me3_rep1
GSM4832449 WT_embryonic stem cells - H3K9me3_rep2
GSM4832450 WT_embryonic stem cells - input
This SubSeries is part of SuperSeries:
GSE132746 Dcaf11 facilitates telomere elongation in early embryos and embryonic stem cells (ESCs) through activating the Zscan4-mediated alternative lengthening telomere (ALT) mechanism
Relations
BioProject PRJNA669690
SRA SRP287498

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE159552_RAW.tar 527.1 Mb (http)(custom) TAR (of BW)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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