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GEO accession:
Series GSE159400
Query DataSets for GSE159400
Status
Public on Jul 19, 2021
Title
PRC1 drives Polycomb-mediated gene repression by controlling transcription initiation and burst frequency
Organisms
Drosophila melanogaster
;
Homo sapiens
;
Mus musculus
Experiment type
Genome binding/occupancy profiling by high throughput sequencing
Expression profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
34608337
Submission date
Oct 12, 2020
Last update date
Oct 19, 2021
Contact name
Paula Dobrinić
Organization name
University of Oxford
Department
Department of Biochemistry
Lab
Rob Klose lab
Street address
South Parks Road
City
Oxford
ZIP/Postal code
OX1 3QU
Country
United Kingdom
Platforms (2)
GPL19415
Illumina NextSeq 500 (Homo sapiens; Mus musculus)
GPL25537
Illumina NextSeq 500 (Drosophila melanogaster; Mus musculus)
Samples (175)
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More...
GSM4828883
RING1AKO.RING1BAID_H2AK119ub1_UNT_rep1
GSM4828884
RING1AKO.RING1BAID_H2AK119ub1_UNT_rep2
GSM4828885
RING1AKO.RING1BAID_H2AK119ub1_UNT_rep3
GSM4828886
RING1AKO.RING1BAID_H2AK119ub1_IAA_2h_rep1
GSM4828887
RING1AKO.RING1BAID_H2AK119ub1_IAA_2h_rep2
GSM4828888
RING1AKO.RING1BAID_H2AK119ub1_IAA_2h_rep3
GSM4828889
RING1AKO.RING1BAID_H2AK119ub1_IAA_4h_rep1
GSM4828890
RING1AKO.RING1BAID_H2AK119ub1_IAA_4h_rep2
GSM4828891
RING1AKO.RING1BAID_H2AK119ub1_IAA_4h_rep3
GSM4828892
RING1AKO.RING1BAID_H3K27me3_UNT_rep1
GSM4828893
RING1AKO.RING1BAID_H3K27me3_UNT_rep2
GSM4828894
RING1AKO.RING1BAID_H3K27me3_UNT_rep3
GSM4828895
RING1AKO.RING1BAID_H3K27me3_IAA_2h_rep1
GSM4828896
RING1AKO.RING1BAID_H3K27me3_IAA_2h_rep2
GSM4828897
RING1AKO.RING1BAID_H3K27me3_IAA_2h_rep3
GSM4828898
RING1AKO.RING1BAID_H3K27me3_IAA_4h_rep1
GSM4828899
RING1AKO.RING1BAID_H3K27me3_IAA_4h_rep2
GSM4828900
RING1AKO.RING1BAID_H3K27me3_IAA_4h_rep3
GSM4828901
RING1AKO.RING1BAID_H3K27me3_IAA_8h_rep1
GSM4828902
RING1AKO.RING1BAID_H3K27me3_IAA_8h_rep2
GSM4828903
RING1AKO.RING1BAID_H3K27me3_IAA_8h_rep3
GSM4828904
RING1AKO.RING1BAID_H3K27me3_IAA_24h_rep1
GSM4828905
RING1AKO.RING1BAID_H3K27me3_IAA_24h_rep2
GSM4828906
RING1AKO.RING1BAID_H3K27me3_IAA_24h_rep3
GSM4828907
RING1AKO.RING1BAID_H3K4me3_UNT_rep1
GSM4828908
RING1AKO.RING1BAID_H3K4me3_UNT_rep2
GSM4828909
RING1AKO.RING1BAID_H3K4me3_UNT_rep3
GSM4828910
RING1AKO.RING1BAID_H3K4me3_IAA_2h_rep1
GSM4828911
RING1AKO.RING1BAID_H3K4me3_IAA_2h_rep2
GSM4828912
RING1AKO.RING1BAID_H3K4me3_IAA_2h_rep3
GSM4828913
RING1AKO.RING1BAID_H3K4me3_IAA_4h_rep1
GSM4828914
RING1AKO.RING1BAID_H3K4me3_IAA_4h_rep2
GSM4828915
RING1AKO.RING1BAID_H3K4me3_IAA_4h_rep3
GSM4828916
RING1AKO.RING1BAID_H3K4me3_IAA_8h_rep1
GSM4828917
RING1AKO.RING1BAID_H3K4me3_IAA_8h_rep2
GSM4828918
RING1AKO.RING1BAID_H3K4me3_IAA_8h_rep3
GSM4828919
RING1AKO.RING1BAID_NativeInput_for_H2AK119ub1_H3K4me3_UNT_rep1
GSM4828920
RING1AKO.RING1BAID_NativeInput_for_H3K27me3_UNT_rep1
GSM4828921
RING1AKO.RING1BAID_NativeInput_UNT_rep2
GSM4828922
RING1AKO.RING1BAID_NativeInput_UNT_rep3
GSM4828923
RING1AKO.RING1BAID_NativeInput_for_H2AK119ub1_H3K4me3_IAA_2h_rep1
GSM4828924
RING1AKO.RING1BAID_NativeInput_for_H3K27me3_IAA_2h_rep1
GSM4828925
RING1AKO.RING1BAID_NativeInput_IAA_2h_rep2
GSM4828926
RING1AKO.RING1BAID_NativeInput_IAA_2h_rep3
GSM4828927
RING1AKO.RING1BAID_NativeInput_for_H2AK119ub1_H3K4me3_IAA_4h_rep1
GSM4828928
RING1AKO.RING1BAID_NativeInput_for_H3K27me3_IAA_4h_rep1
GSM4828929
RING1AKO.RING1BAID_NativeInput_IAA_4h_rep2
GSM4828930
RING1AKO.RING1BAID_NativeInput_IAA_4h_rep3
GSM4828931
RING1AKO.RING1BAID_NativeInput_for_H3K4me3_IAA_8h_rep1
GSM4828932
RING1AKO.RING1BAID_NativeInput_for_H3K27me3_IAA_8h_rep1
GSM4828933
RING1AKO.RING1BAID_NativeInput_IAA_8h_rep2
GSM4828934
RING1AKO.RING1BAID_NativeInput_IAA_8h_rep3
GSM4828935
RING1AKO.RING1BAID_NativeInput_IAA_24h_rep1
GSM4828936
RING1AKO.RING1BAID_NativeInput_IAA_24h_rep2
GSM4828937
RING1AKO.RING1BAID_NativeInput_IAA_24h_rep3
GSM4828938
RING1AKO.RING1BAID_RING1B_UNT_rep1
GSM4828939
RING1AKO.RING1BAID_RING1B_UNT_rep2
GSM4828940
RING1AKO.RING1BAID_RING1B_UNT_rep3
GSM4828941
RING1AKO.RING1BAID_RING1B_IAA_2h_rep1
GSM4828942
RING1AKO.RING1BAID_RING1B_IAA_2h_rep2
GSM4828943
RING1AKO.RING1BAID_RING1B_IAA_2h_rep3
GSM4828944
RING1AKO.RING1BAID_RING1B_IAA_4h_rep1
GSM4828945
RING1AKO.RING1BAID_RING1B_IAA_4h_rep2
GSM4828946
RING1AKO.RING1BAID_RING1B_IAA_4h_rep3
GSM4828947
RING1AKO.RING1BAID_SUZ12_UNT_rep1
GSM4828948
RING1AKO.RING1BAID_SUZ12_UNT_rep2
GSM4828949
RING1AKO.RING1BAID_SUZ12_UNT_rep3
GSM4828950
RING1AKO.RING1BAID_SUZ12_IAA_2h_rep1
GSM4828951
RING1AKO.RING1BAID_SUZ12_IAA_2h_rep2
GSM4828952
RING1AKO.RING1BAID_SUZ12_IAA_2h_rep3
GSM4828953
RING1AKO.RING1BAID_SUZ12_IAA_4h_rep1
GSM4828954
RING1AKO.RING1BAID_SUZ12_IAA_4h_rep2
GSM4828955
RING1AKO.RING1BAID_SUZ12_IAA_4h_rep3
GSM4828956
RING1AKO.RING1BAID_SUZ12_IAA_8h_rep1
GSM4828957
RING1AKO.RING1BAID_SUZ12_IAA_8h_rep2
GSM4828958
RING1AKO.RING1BAID_SUZ12_IAA_8h_rep3
GSM4828959
RING1AKO.RING1BAID_SUZ12_IAA_24h_rep1
GSM4828960
RING1AKO.RING1BAID_SUZ12_IAA_24h_rep2
GSM4828961
RING1AKO.RING1BAID_SUZ12_IAA_24h_rep3
GSM4828962
RING1AKO.RING1BAID_XInput_UNT_rep1
GSM4828963
RING1AKO.RING1BAID_XInput_UNT_rep2
GSM4828964
RING1AKO.RING1BAID_XInput_UNT_rep3
GSM4828965
RING1AKO.RING1BAID_XInput_IAA_2h_rep1
GSM4828966
RING1AKO.RING1BAID_XInput_IAA_2h_rep2
GSM4828967
RING1AKO.RING1BAID_XInput_IAA_2h_rep3
GSM4828968
RING1AKO.RING1BAID_XInput_IAA_4h_rep1
GSM4828969
RING1AKO.RING1BAID_XInput_IAA_4h_rep2
GSM4828970
RING1AKO.RING1BAID_XInput_IAA_4h_rep3
GSM4828971
RING1AKO.RING1BAID_XInput_IAA_8h_rep1
GSM4828972
RING1AKO.RING1BAID_XInput_IAA_8h_rep2
GSM4828973
RING1AKO.RING1BAID_XInput_IAA_8h_rep3
GSM4828974
RING1AKO.RING1BAID_XInput_IAA_24h_rep1
GSM4828975
RING1AKO.RING1BAID_XInput_IAA_24h_rep2
GSM4828976
RING1AKO.RING1BAID_XInput_IAA_24h_rep3
GSM4828977
RING1AKO.RING1BAID_PolII_NTD_UNT_rep1
GSM4828978
RING1AKO.RING1BAID_PolII_NTD_UNT_rep2
GSM4828979
RING1AKO.RING1BAID_PolII_NTD_UNT_rep3
GSM4828980
RING1AKO.RING1BAID_PolII_NTD_IAA_2h_rep1
GSM4828981
RING1AKO.RING1BAID_PolII_NTD_IAA_2h_rep2
GSM4828982
RING1AKO.RING1BAID_PolII_NTD_IAA_2h_rep3
GSM4828983
RING1AKO.RING1BAID_PolII_NTD_IAA_4h_rep1
GSM4828984
RING1AKO.RING1BAID_PolII_NTD_IAA_4h_rep2
GSM4828985
RING1AKO.RING1BAID_PolII_NTD_IAA_4h_rep3
GSM4828986
RING1AKO.RING1BAID_PolII_NTD_IAA_8h_rep1
GSM4828987
RING1AKO.RING1BAID_PolII_NTD_IAA_8h_rep2
GSM4828988
RING1AKO.RING1BAID_PolII_NTD_IAA_8h_rep3
GSM4828989
RING1AKO.RING1BAID_PolII_Ser5P_UNT_rep1
GSM4828990
RING1AKO.RING1BAID_PolII_Ser5P_UNT_rep2
GSM4828991
RING1AKO.RING1BAID_PolII_Ser5P_UNT_rep3
GSM4828992
RING1AKO.RING1BAID_PolII_Ser5P_IAA_2h_rep1
GSM4828993
RING1AKO.RING1BAID_PolII_Ser5P_IAA_2h_rep2
GSM4828994
RING1AKO.RING1BAID_PolII_Ser5P_IAA_2h_rep3
GSM4828995
RING1AKO.RING1BAID_PolII_Ser2P_UNT_rep1
GSM4828996
RING1AKO.RING1BAID_PolII_Ser2P_UNT_rep2
GSM4828997
RING1AKO.RING1BAID_PolII_Ser2P_UNT_rep3
GSM4828998
RING1AKO.RING1BAID_PolII_Ser2P_IAA_2h_rep1
GSM4828999
RING1AKO.RING1BAID_PolII_Ser2P_IAA_2h_rep2
GSM4829000
RING1AKO.RING1BAID_PolII_Ser2P_IAA_2h_rep3
GSM4829001
RING1AKO.RING1BAID_PolII_XInput_UNT_rep1
GSM4829002
RING1AKO.RING1BAID_PolII_XInput_UNT_rep2
GSM4829003
RING1AKO.RING1BAID_PolII_XInput_UNT_rep3
GSM4829004
RING1AKO.RING1BAID_PolII_XInput_IAA_2h_rep1
GSM4829005
RING1AKO.RING1BAID_PolII_XInput_IAA_2h_rep2
GSM4829006
RING1AKO.RING1BAID_PolII_XInput_IAA_2h_rep3
GSM4829007
RING1AKO.RING1BAID_PolII_XInput_IAA_4h_rep1
GSM4829008
RING1AKO.RING1BAID_PolII_XInput_IAA_4h_rep2
GSM4829009
RING1AKO.RING1BAID_PolII_XInput_IAA_4h_rep3
GSM4829010
RING1AKO.RING1BAID_PolII_XInput_IAA_8h_rep1
GSM4829011
RING1AKO.RING1BAID_PolII_XInput_IAA_8h_rep2
GSM4829012
RING1AKO.RING1BAID_PolII_XInput_IAA_8h_rep3
GSM4829013
RING1AKO.RING1BAID_NucRNA_UNT_rep1
GSM4829014
RING1AKO.RING1BAID_NucRNA_UNT_rep2
GSM4829015
RING1AKO.RING1BAID_NucRNA_UNT_rep3
GSM4829016
RING1AKO.RING1BAID_NucRNA_IAA_2h_rep1
GSM4829017
RING1AKO.RING1BAID_NucRNA_IAA_2h_rep2
GSM4829018
RING1AKO.RING1BAID_NucRNA_IAA_2h_rep3
GSM4829019
RING1AKO.RING1BAID_NucRNA_IAA_4h_rep1
GSM4829020
RING1AKO.RING1BAID_NucRNA_IAA_4h_rep2
GSM4829021
RING1AKO.RING1BAID_NucRNA_IAA_4h_rep3
GSM4829022
RING1AKO.RING1BAID_NucRNA_IAA_8h_rep1
GSM4829023
RING1AKO.RING1BAID_NucRNA_IAA_8h_rep2
GSM4829024
RING1AKO.RING1BAID_NucRNA_IAA_8h_rep3
GSM4829025
RING1AKO.RING1BAID_NucRNA_IAA_24h_rep1
GSM4829026
RING1AKO.RING1BAID_NucRNA_IAA_24h_rep2
GSM4829027
RING1AKO.RING1BAID_NucRNA_IAA_24h_rep3
GSM5360438
E14_wt_ctrl_H3K27me3_rep1
GSM5360439
SUZ12dTAG_H3K27me3_UNT_rep1
GSM5360440
SUZ12dTAG_H3K27me3_dTAG_2h_rep1
GSM5360441
E14_wt_ctrl_H3K27me3_rep2
GSM5360442
SUZ12dTAG_H3K27me3_UNT_rep2
GSM5360443
SUZ12dTAG_H3K27me3_dTAG_2h_rep2
GSM5360444
E14_wt_ctrl_H3K27me3_rep3
GSM5360445
SUZ12dTAG_H3K27me3_UNT_rep3
GSM5360446
SUZ12dTAG_H3K27me3_dTAG_2h_rep3
GSM5360447
E14_wt_ctrl_NativeInput_rep1
GSM5360448
SUZ12dTAG_NativeInput_UNT_rep1
GSM5360449
SUZ12dTAG_NativeInput_dTAG_2h_rep1
GSM5360450
E14_wt_ctrl_NativeInput_rep2
GSM5360451
SUZ12dTAG_NativeInput_UNT_rep2
GSM5360452
SUZ12dTAG_NativeInput_dTAG_2h_rep2
GSM5360453
E14_wt_ctrl_NativeInput_rep3
GSM5360454
SUZ12dTAG_NativeInput_UNT_rep3
GSM5360455
SUZ12dTAG_NativeInput_dTAG_2h_rep3
GSM5360456
TIR1_wt_ctrl_RING1B_rep1
GSM5360457
TIR1_wt_ctrl_RING1B_rep2
GSM5360458
TIR1_wt_ctrl_RING1B_rep3
GSM5360459
TIR1_wt_ctrl_XInput_rep1
GSM5360460
TIR1_wt_ctrl_XInput_rep2
GSM5360461
TIR1_wt_ctrl_XInput_rep3
GSM5360468
SUZ12dTAG_NucRNA_UNT_rep1
GSM5360469
SUZ12dTAG_NucRNA_dTAG_2h_rep1
GSM5360470
SUZ12dTAG_NucRNA_UNT_rep2
GSM5360471
SUZ12dTAG_NucRNA_dTAG_2h_rep2
GSM5360472
SUZ12dTAG_NucRNA_UNT_rep3
GSM5360473
SUZ12dTAG_NucRNA_dTAG_2h_rep3
This SuperSeries is composed of the following SubSeries:
GSE159398
PRC1 drives Polycomb-mediated gene repression by controlling transcription initiation and burst frequency [ChIP-seq]
GSE159399
PRC1 drives Polycomb-mediated gene repression by controlling transcription initiation and burst frequency [RNA-seq]
Relations
BioProject
PRJNA668780
Download family
Format
SOFT formatted family file(s)
SOFT
MINiML formatted family file(s)
MINiML
Series Matrix File(s)
TXT
Supplementary file
Size
Download
File type/resource
GSE159400_RAW.tar
11.5 Gb
(http)
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TAR (of BW)
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