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Series GSE159132 Query DataSets for GSE159132
Status Public on Dec 08, 2020
Title Global examination of LncMyoD binding sites using ChIRP-seq
Organism Mus musculus
Experiment type Other
Summary We report the application of ChIRP-seq on examination of LncMyoD binding sittes in differentiated myotubes We observed the global binding sites of LncMyoD in differentiated myotubes.
 
Overall design Examination of LncMyoD binding sites in differentiated myotubes.
 
Contributor(s) Dong A, Cheung TH
Citation(s) 33293420
Submission date Oct 06, 2020
Last update date Mar 09, 2021
Contact name Tom Cheung
Organization name Hong Kong University of Science and Technology
Department Division of Life Science
Street address Clear Water Bay, Kowloon
City Hong Kong
ZIP/Postal code N/A
Country Hong Kong
 
Platforms (1)
GPL28457 DNBSEQ-G400 (Mus musculus)
Samples (6)
GSM4819899 LncMyoD_odd Rep 1
GSM4819900 LncMyoD_even Rep 1
GSM4819901 LncMyoD_Input Rep 1
Relations
BioProject PRJNA667739
SRA SRP286565

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE159132_ChIRP_1.bw 218.8 Mb (ftp)(http) BW
GSE159132_ChIRP_1_peaks.narrowPeak.gz 3.1 Mb (ftp)(http) NARROWPEAK
GSE159132_ChIRP_2.bw 288.6 Mb (ftp)(http) BW
GSE159132_ChIRP_2_peaks.narrowPeak.gz 3.5 Mb (ftp)(http) NARROWPEAK
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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