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| Status |
Public on Apr 06, 2021 |
| Title |
ETS1 ChIP-seq in human monocytic THP-1 cells |
| Organism |
Homo sapiens |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
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| Summary |
ChIP-seq for ETS1 in THP-1 cells after stimulation with the the natural VDR ligand 1,25-dihydroxyvitamin D3 (1,25(OH)2D3)
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| Overall design |
THP-1 cells were treated for 24 h with 100 nM 1,25(OH)2D3 or vehicle before ChIP assay
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| Contributor(s) |
Seuter S, Neme A, Carlberg C |
| Citation(s) |
33753848 |
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| Submission date |
Aug 31, 2020 |
| Last update date |
Apr 06, 2021 |
| Contact name |
Carsten Carlberg |
| E-mail(s) |
[email protected]
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| Organization name |
University of Eastern Finland
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| Department |
Institute of Biomedicine
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| Street address |
Yliopistonranta 1D
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| City |
Kuopio |
| ZIP/Postal code |
70211 |
| Country |
Finland |
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| Platforms (1) |
| GPL11154 |
Illumina HiSeq 2000 (Homo sapiens) |
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| Samples (4)
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| GSM4759000 |
THP-1, ETS1, 24 h EtOH, replicate 1 |
| GSM4759001 |
THP-1, ETS1, 24 h EtOH, replicate 2 |
| GSM4759002 |
THP-1, ETS1, 24 h 1,25(OH)2D3, replicate 1 |
| GSM4759003 |
THP-1, ETS1, 24 h 1,25(OH)2D3, replicate 2 |
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| Relations |
| BioProject |
PRJNA660446 |
| SRA |
SRP279485 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE157209_THP1_ETS1_E24.tdf |
226.1 Mb |
(ftp)(http) |
TDF |
| GSE157209_THP1_ETS1_V24.tdf |
224.3 Mb |
(ftp)(http) |
TDF |
SRA Run Selector |
| Raw data are available in SRA |
| Processed data are available on Series record |
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