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Series GSE151832 Query DataSets for GSE151832
Status Public on Aug 12, 2021
Title Super-enhancer based development of an endothelial specific lentiviral vector
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Hypoxia-regulated endothelial-specific lentiviral vector that can be used for endothelial-targeted gene therapy.
 
Overall design Construction of Lentiviral vectors containing endothelial-specific enhancer driving expression of reporter gene, vectors evaluation in vitro and Knock out validation studies with CRISPR/Cas9, followed by RNA-Seq in EA.hy926.
 
Contributor(s) Laram-Karam N, Mushimiyimana I, Kaikkonen-Määttä M, Niskanen H, Ylä-Herttuala S
Citation(s) 34320216
Submission date Jun 04, 2020
Last update date Aug 14, 2021
Contact name Minna Kaikkonen-Määttä
Organization name A. I. Virtanen Institute
Street address P. O. Box 1627
City Kuopio
ZIP/Postal code 70721
Country Finland
 
Platforms (1)
GPL21697 NextSeq 550 (Homo sapiens)
Samples (8)
GSM4592050 EA.hy.RNA.DeltaE2.rep1
GSM4592051 EA.hy.RNA.DeltaE2.rep2
GSM4592052 EA.hy.RNA.DeltaE2.rep3
Relations
BioProject PRJNA637380
SRA SRP266195

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE151832_RAW.tar 584.3 Mb (http)(custom) TAR (of BEDGRAPH)
GSE151832_RNA-Seq_EA.hy9268_DeltaSE2_DeltaSE_E2_rpkm.txt.gz 3.5 Mb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

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