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| Status |
Public on Jun 09, 2020 |
| Title |
Transcriptomic Analysis of the Regulation of Cancer Stemness in Breast Ductal Carcinoma In Situ by Vitamin D Compounds [Bisulfite-seq] |
| Organism |
Homo sapiens |
| Experiment type |
Methylation profiling by high throughput sequencing
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| Summary |
A global profiling of changes in the gene signature of DCIS regulated by vitamin D compounds was examined in MCF10DCIS mammospheres.
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| Overall design |
DNA CpG methylation profiles of MCF10DCIS mammospheres treated with two different vitamin D compounds for 5 days
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| Contributor(s) |
Shan NL, Minden A, Furmanski P, Bak MJ, Cai L, Wernyj R, Sargsyan D, Cheng D, Wu R, Kuo H, Li S, Fang M, Maehr H, Kong A, Suh N |
| Citation(s) |
32467291 |
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| Submission date |
Apr 13, 2020 |
| Last update date |
Jun 09, 2020 |
| Contact name |
Nanjoo N/A Suh |
| E-mail(s) |
[email protected]
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| Phone |
8484458030
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| Organization name |
Rutgers, The State University of New Jersey
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| Department |
Chemical Biology
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| Street address |
164 Frelinghuysen Road
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| City |
Piscataway |
| State/province |
NJ |
| ZIP/Postal code |
08854 |
| Country |
USA |
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| Platforms (1) |
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| Samples (3) |
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| This SubSeries is part of SuperSeries: |
| GSE148548 |
Transcriptomic Analysis of the Regulation of Cancer Stemness in Breast Ductal Carcinoma In Situ by Vitamin D Compounds |
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| Relations |
| BioProject |
PRJNA625010 |
| SRA |
SRP256263 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE148547_RAW.tar |
106.8 Mb |
(http)(custom) |
TAR (of COV) |
SRA Run Selector |
| Raw data are available in SRA |
| Processed data provided as supplementary file |
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