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Series GSE146975 Query DataSets for GSE146975
Status Public on Mar 12, 2023
Title EGFR activity addiction facilitates anti-ERBB based combination treatment of squamous bladder cancer
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Recent findings suggested a benefit of anti-EGFR therapy for basal-like muscle invasive bladder cancer (MIBC). However, impact on bladder cancer with substantial squamous differentiated (Sq-BLCA) and especially pure squamous cell carcinoma (SCC) remains unknown. Therefore, we comprehensively characterized pure and mixed Sq-BLCA (n=125) on genetic and protein expression level, and performed functional pathway and drug-response analyses with cell line models and isolated primary SCC (p-SCC) cells of the human urinary bladder. We identified abundant EGFR expression in 95% of Sq-BLCA without evidence for activating EGFR mutations. Both SCaBER and p-SCC cells were sensitive to EGFR tyrosine kinase inhibitors (TKIs: erlotinib and gefitinib). Combined treatment with anti-EGFR TKIs and varying chemotherapeutics led to a concentration-dependent synergism in SCC cells according to the Chou-Talalay method. In addition, siRNA knockdown of EGFR impaired SCaBER viability suggesting a putative ‘‘Achilles heel’’ of Sq-BLCA. The observed effects seem Sq-BLCA-specific since non-basal urothelial cancer cells were characterized by poor TKI sensitivity associated with a short-term feedback response by upregulating EGFR and ERBB3 expression. Hence, our findings give novel insights into a crucial, Sq-BLCA-specific role of the ERBB signaling pathway proposing improved effectiveness of combined anti-EGFR and chemotherapeutic regimens in squamous bladder cancers with wild-type EGFR-overexpression.
 
Overall design Tumor tissue of an individual diagnosed with a pure SCC was obtained from the RWTH centralized biomaterial bank (RWTH cBMB) for SCC-tumor cell (p-SCC) isolation. Primary cells derived from pure SCC (p-SCC) tissue were established as a cell culture ex vivo model. p-SCC cells (n=1) were characterized and compared with the original tumor tissue (n=1) by whole transcriptomic analysis. SCaBER (n=1) and J82 cell lines (n=1) served as squamous and urothelial-like controls.
 
Contributor(s) Rose M, Denecke B, Gaisa NT
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Submission date Mar 13, 2020
Last update date Mar 14, 2023
Contact name Bernd Denecke
E-mail(s) [email protected]
Phone +49 241 8089918
Organization name RWTH Aachen University
Department IZKF Aachen
Street address Pauwelsstrasse 30
City Aachen
State/province NRW
ZIP/Postal code 52074
Country Germany
 
Platforms (1)
GPL23126 [Clariom_D_Human] Affymetrix Human Clariom D Assay [transcript (gene) version]
Samples (4)
GSM4411628 SCC tumor tissue
GSM4411629 p-SCC primary cells
GSM4411630 SCaBER cell line
Relations
BioProject PRJNA612537

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SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE146975_RAW.tar 101.3 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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