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Series GSE146178 Query DataSets for GSE146178
Status Public on Dec 31, 2020
Title Transcriptomic profiling of primed and naive primate pluripotent stem cells by RNA-sequencing
Organism Macaca mulatta
Experiment type Expression profiling by high throughput sequencing
Summary Analysis of rhesus monkey ESC cells that have been reprogrammed to naïve pluripotency using 7 different protocols including, TL2i, 4i/L/b, E-NHSM, NHSM-v, t2iLGöY, LCDM (EPS), TL-CDK8/19i and compared to primed cells.
 
Overall design Primed cells vs Naïve cells
 
Contributor(s) Aksoy I, Savatier P
Citation(s) 33382978
Submission date Mar 02, 2020
Last update date Feb 01, 2021
Contact name Irene Aksoy
E-mail(s) [email protected]
Organization name Stem Cell and Brain Research Institute
Street address 18 avenue du Doyen Lepine
City Lyon
ZIP/Postal code 69500
Country France
 
Platforms (1)
GPL21120 Illumina NextSeq 500 (Macaca mulatta)
Samples (27)
GSM4367812 Primed rep 1
GSM4367813 Primed rep 2
GSM4367814 Primed rep 3
Relations
BioProject PRJNA609666
SRA SRP251249

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE146178_4i_L_b_counts.csv.gz 128.2 Kb (ftp)(http) CSV
GSE146178_E_NHSM_counts.csv.gz 132.2 Kb (ftp)(http) CSV
GSE146178_LCDM_counts.csv.gz 133.7 Kb (ftp)(http) CSV
GSE146178_NHSMv_counts.csv.gz 125.4 Kb (ftp)(http) CSV
GSE146178_Primed_counts.csv.gz 197.0 Kb (ftp)(http) CSV
GSE146178_TL2i_counts.csv.gz 134.6 Kb (ftp)(http) CSV
GSE146178_TL_CDK8i_counts.csv.gz 128.0 Kb (ftp)(http) CSV
GSE146178_t2iLGOY_counts.csv.gz 129.7 Kb (ftp)(http) CSV
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Raw data are available in SRA
Processed data are available on Series record

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