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| Status |
Public on Jan 03, 2020 |
| Title |
Gene expression analysis in fly ovaries from wuho mutant |
| Organism |
Drosophila melanogaster |
| Experiment type |
Expression profiling by high throughput sequencing
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| Summary |
Purpose: The goal of this study is to analyze genes affected by wuho mutation in Drosophila ovary
Ovarian mRNA prolife of 7 day old control flies and flies bearing wuho mutation, in duplicate, using Illumina NextSeq 500. The sequence reads that passed quality filters were analyzed at the transcript isoform level with two methods: Burrows–Wheeler Aligner (BWA) followed by ANOVA (ANOVA) and TopHat followed by Cufflinks.
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| Overall design |
Ovarian mRNA prolife of 7 day-old adult control w1118 flies and flies bearing wuho mutant in duplicate, using Illumina NextSeq 500 system.
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| Contributor(s) |
Hsu H, Rastegari E |
| Citation(s) |
31941704 |
| |
| Submission date |
Jan 02, 2020 |
| Last update date |
Apr 06, 2020 |
| Contact name |
Hweijan Hsu |
| E-mail(s) |
[email protected]
|
| Phone |
886-2-2787-1541
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| Organization name |
Academia Research
|
| Department |
Institute of Cellular Biology
|
| Lab |
Room 337
|
| Street address |
no 128, Sec 2, Academia Rd. Nankang
|
| City |
Taipei |
| ZIP/Postal code |
11529 |
| Country |
Taiwan |
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| Platforms (1) |
| GPL19132 |
Illumina NextSeq 500 (Drosophila melanogaster) |
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| Samples (4)
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| Relations |
| BioProject |
PRJNA598567 |
| SRA |
SRP239273 |
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