|
| Status |
Public on Dec 19, 2019 |
| Title |
Transcriptomic dysregulation of SDCCGA8 KO retinal epithelial and immature neuronal cells. |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
RNA-seq transcirptomic profiling of SDCCAG8-deficient cells generated by gene-editing, identified differentially expressed genes that are enriched for in neurodevelopmental processes and extracellular matrix deposition and maintenance
|
| |
|
| Overall design |
RPE1 WT, RPE1 SDCCAG8 -/-, SH-SY5Y WT and SH-SY5Y SDCCAG8 -/- cells were sequenced in triplicate at baseline conditions and after serum starvation.
|
| |
|
| Contributor(s) |
Flynn M |
| Citation(s) |
31868218 |
| |
| Submission date |
Dec 19, 2019 |
| Last update date |
Mar 23, 2020 |
| Contact name |
Mairead Flynn |
| E-mail(s) |
[email protected]
|
| Organization name |
NUI Galway
|
| Department |
Centre for Chromosome Biology
|
| Lab |
Biomedical Science Building
|
| Street address |
Corrib village, NUI Galway
|
| City |
Galway |
| ZIP/Postal code |
H91 W2TY |
| Country |
Ireland |
| |
|
| Platforms (1) |
|
| Samples (23)
|
|
| Relations |
| BioProject |
PRJNA596651 |
| SRA |
SRP238212 |
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