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Series GSE141853 Query DataSets for GSE141853
Status Public on Feb 11, 2020
Title Genetic Variations in Type 1 Diabetes Reconfigure the 3D Chromatin Organization of T Cells
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 32049053
Submission date Dec 11, 2019
Last update date Mar 10, 2020
Contact name Naomi Goldman
Organization name University of Pennsylvania
Lab Golnaz Vahedi
Street address 324 BRB II/III, 421 Curie Blvd
City Philadelphia
State/province PA
ZIP/Postal code 19104
Country USA
 
Platforms (2)
GPL19057 Illumina NextSeq 500 (Mus musculus)
GPL21626 NextSeq 550 (Mus musculus)
Samples (52)
GSM4214118 ATAC-seq_DP_BL6_Rep1B_1T
GSM4214119 ATAC-seq_DP_BL6_Rep1B_2T
GSM4214120 ATAC-seq_DP_BL6_Rep1B_3T
This SuperSeries is composed of the following SubSeries:
GSE141845 Genetic Variations in Type 1 Diabetes Reconfigure the 3D Chromatin Organization of T Cells [ATAC-seq]
GSE141846 Genetic Variations in Type 1 Diabetes Reconfigure the 3D Chromatin Organization of T Cells [ChIP-seq]
GSE141847 Genetic Variations in Type 1 Diabetes Reconfigure the 3D Chromatin Organization of T Cells [HiChIP-seq]
Relations
BioProject PRJNA594953

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE141853_RAW.tar 14.0 Gb (http)(custom) TAR (of BEDPE, BW, TAB)
SRA Run SelectorHelp
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