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| Status |
Public on Nov 27, 2020 |
| Title |
Single-cell RNA-sequencing of γδ-T cells from peripheral blood and breast tumour microenvironment. |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
γδ-T cells from PBMCs of healthy donors and immune cells in breast tumour microenvironment.
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| |
|
| Overall design |
γδ-T cells were extracted from PBMCs of three healthy donors. Cells from donors HD4 and HD5 were pooled at a 1:1 ratio prior to loading onto 10X.
CD45+ cells were extracted from fresh breast tumours of two patients and loaded onto 10X.
Please note that raw data for the 'BC' samples are not provided (more details requested).
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| |
|
| Contributor(s) |
Boufea K, Gonzalez-Huici V, Lindberg M, Symeonides S, Oikonomidou O, Batada N |
| Citation(s) |
33268347 |
| |
| Submission date |
Dec 09, 2019 |
| Last update date |
Jan 04, 2021 |
| Contact name |
Nizar N. Batada |
| E-mail(s) |
[email protected]
|
| Organization name |
Institute for Genetics and Molecular Medicine, University of Edinburgh
|
| Street address |
Crew Road
|
| City |
Edinburgh |
| ZIP/Postal code |
EH4 2XU |
| Country |
United Kingdom |
| |
|
| Platforms (2) |
| GPL16791 |
Illumina HiSeq 2500 (Homo sapiens) |
| GPL24676 |
Illumina NovaSeq 6000 (Homo sapiens) |
|
| Samples (4)
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|
| Relations |
| BioProject |
PRJNA594341 |
| SRA |
SRP235263 |
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