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Series GSE139030 Query DataSets for GSE139030
Status Public on Oct 17, 2022
Title Makorin 1 controls embryonic patterning by alleviating Bruno1-mediated repression of oskar translation
Organism Drosophila melanogaster
Experiment type Other
Summary Makorins are evolutionary conserved proteins that contain C3H-type zinc finger modules and a RING E3 ubiquitin ligase domain. In Drosophila maternal Makorin 1 (Mkrn1) has been linked to embryonic patterning but the mechanism remained unsolved. Here, we show that Mkrn1 is essential for axis specification and pole plasm assembly by translational activation of oskar. We demonstrate that Mkrn1 interacts with poly(A) binding protein (pAbp) and binds specifically to osk 3’ UTR in regions overlapping Bruno1 (Bru1) responsive elements (BREs), which regulate osk translation. We observe increased association of the translational repressor Bru1 with osk mRNA upon depletion of Mkrn1, indicating that both proteins compete for osk binding. Consistently, reducing Bru1 dosage partially rescues viability and Osk protein level in ovaries from Mkrn1 females. We conclude that Mkrn1 controls embryonic patterning and germ cell formation by specifically activating osk translation, most likely by competing with Bru1 to bind to osk 3’ UTR.
 
Overall design iCLIP analysis of Mkrn1 in ovaries
 
Contributor(s) Dold A, Hänel H, Busch A, Brüggemann M, Zarnack K, König J, Roignant J
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Submission date Oct 17, 2019
Last update date Oct 19, 2022
Contact name Annabelle Dold
Organization name Institute of Molecular Biology, IMB
Lab Roignant
Street address Ackermannweg 4
City Mainz
ZIP/Postal code 55128
Country Germany
 
Platforms (1)
GPL19132 Illumina NextSeq 500 (Drosophila melanogaster)
Samples (5)
GSM4127081 imb_roignant_2019_12_Neg_1
GSM4127082 imb_roignant_2019_12_Mkrn1_1
GSM4127083 imb_roignant_2019_12_Mkrn1_2
Relations
BioProject PRJNA578112
SRA SRP226066

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Supplementary file Size Download File type/resource
GSE139030_RAW.tar 95.6 Mb (http)(custom) TAR (of BW)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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