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Series GSE137027 Query DataSets for GSE137027
Status Public on May 01, 2020
Title ChIPseq analyses of BvgA in Bordetella pertussis
Organism Bordetella pertussis
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary We examined the BvgA fixation on the genome of B. pertussis in different strains and culture conditions
 
Overall design NextSeq 500 sequencine of ChIPseq samples obtained by the BvgA antibodies in different Bordetella pertussis strains and culture conditions
 
Contributor(s) Loic C
Citation(s) 32430408
Submission date Sep 06, 2019
Last update date Jun 16, 2020
Contact name loic coutte
E-mail(s) [email protected]
Phone 33320871146
Organization name INSERM
Department microbiology
Street address 1 rue du Pr Calmette, U1019 INSERM
City Lille
ZIP/Postal code 59021
Country France
 
Platforms (1)
GPL27446 Illumina NextSeq 500 (Bordetella pertussis)
Samples (7)
GSM4065884 BPSM_a-BvgA_CHIPSEQ-RUN1_sample1
GSM4065885 BPSM_Mg_a-BvgA_CHIPSEQ-RUN1_sample2
GSM4065886 BPSM_dBvgA_a-BvgA_CHIPSEQ-RUN1_sample3
Relations
BioProject PRJNA564310
SRA SRP220702

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE137027_coutte_processed_data_files.xlsx 28.5 Kb (ftp)(http) XLSX
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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