|
| Status |
Public on Jul 26, 2022 |
| Title |
Next Generation Sequencing (NGS) Facilitates Quantitative Analysis of Wildtype and Zmynd8-Overexpressing Transcriptomes in E14 Mouse Embryonic Stem Cells (mESCs) |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
Purpose: The goal of this study is to identify Zmynd8-regulated genes.
|
| |
|
| Overall design |
Expression profiles of parental E14 mESCs, E14 mESCs expressing low exogenous levels of Zmynd8, and E14m ESCs expressing high exogenous leves of Zmynd8 levels were generated by RNA-Seq, in triplicates, using Illumina Nova 6000.
|
| |
|
| Contributor(s) |
Hardy WR, Green MR |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| |
| Submission date |
Jul 26, 2019 |
| Last update date |
Jul 26, 2022 |
| Contact name |
Aimin Yan |
| E-mail(s) |
[email protected]
|
| Organization name |
University of Massachusetts Medical School
|
| Street address |
55 N Lake Ave
|
| City |
Worcester |
| State/province |
MA |
| ZIP/Postal code |
01655 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL24676 |
Illumina NovaSeq 6000 (Homo sapiens) |
|
| Samples (9)
|
| GSM3983075 |
E14 mESCs expressing low exogenous levels of Zmynd8 replicate#1 [WRH1b] |
| GSM3983076 |
E14 mESCs expressing low exogenous levels of Zmynd8 replicate#2 [WRH2b] |
| GSM3983077 |
E14 mESCs expressing low exogenous levels of Zmynd8 replicate#3 [WRH3b] |
| GSM3983078 |
E14 mESCs expressing high exogenous levels of Zmynd8 replicate#1 [WRH1c] |
| GSM3983079 |
E14 mESCs expressing high exogenous levels of Zmynd8 replicate#2 [WRH2c] |
| GSM3983080 |
E14 mESCs expressing high exogenous levels of Zmynd8 replicate#3 [WRH3c] |
|
| Relations |
| BioProject |
PRJNA556927 |
| SRA |
SRP216554 |
Less...
More...