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Series GSE134139 Query DataSets for GSE134139
Status Public on Jul 12, 2019
Title 10X single-cell RNASeq profiling of control or Ptpn2-null P14 CD8+ T-cells from mice chronically infected with LCMV Clone 13
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary 5 distinct populations of exhausted CD8+ T cells occur in chronic LCMV Clone 13 infected mice depleted of CD4+ T cells
 
Overall design Single-cell RNA-sequencing based profiling of transferred control or Ptpn2-null P14 CD8+ T-cells from mice chronically infected with LCMV Clone 13 (day 30 post-infection)
 
Contributor(s) LaFleur MW, Miller BC
Citation(s) 31527834
Submission date Jul 11, 2019
Last update date Oct 11, 2019
Contact name Brian Christopher Miller
E-mail(s) [email protected]
Organization name Harvard Medical School
Department Immunology
Lab Sharpe Lab
Street address 77 Avenue Louis Pasteur
City Boston
State/province MA
ZIP/Postal code 02115
Country USA
 
Platforms (1)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (2)
GSM3937878 ctrl_CD8_LCMV
GSM3937879 Ptpn2_CD8_LCMV
This SubSeries is part of SuperSeries:
GSE134413 PTPN2 regulates the generation of exhausted CD8+ T cell subpopulations and restrains tumor immunity
Relations
BioProject PRJNA554074
SRA SRP214232

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE134139_RAW.tar 26.5 Mb (http)(custom) TAR (of MTX, TSV)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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