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Series GSE12292 Query DataSets for GSE12292
Status Public on Dec 14, 2008
Title Chromosomal High Affinity Binding Sites for the Drosophila Dosage Compensation Complex.
Organism Drosophila melanogaster
Experiment type Genome binding/occupancy profiling by genome tiling array
Summary We identified 131 high affinity sites of the Drosophila DCC combining residual ChIP-chip profiles after differential crosslinking and RNAi-mediated knockdown of spreading factors

Keywords: ChIP-chip
 
Overall design MSL1 and MSL2 ChIP under various conditions including differential crosslinking and RNAi against MOF, MLE and MSL3. 2-4 replicates per experiment. dye-swaps as indicated in sample description.
 
Contributor(s) Straub T, Grimaud C, Gilfillan GD, Mitterweger A, Becker PB
Citation(s) 19079572
Submission date Jul 30, 2008
Last update date Mar 20, 2012
Contact name Tobias Straub
E-mail(s) [email protected]
Organization name LMU Munich
Department Biomedical Center, Bioinformatics
Street address Großhadener Str. 9
City Martinsried
ZIP/Postal code 82152
Country Germany
 
Platforms (1)
GPL7107 Adolf Butenandt Institute Drosophila melanogaster 385K Tiling Array version 1
Samples (20)
GSM309009 MSL1 wt SL2 cell line replicate 1
GSM309010 MSL1 wt SL2 cell line replicate 2
GSM309011 MSL1 wt SL2 cell line replicate 3
Relations
BioProject PRJNA113583

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE12292_RAW.tar 265.0 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table
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