|
| Status |
Public on Jul 03, 2018 |
| Title |
Expression data for two primary and two recurrent MTB;TAN-derived tumor cell lines |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by array
|
| Summary |
Baseline gene expression for two primary and two recurrent tumor cell lines derived from MTB;TAN transgenic mice. Microarrays were performed in biological duplicate to determine differential gene expression between primary and recurrent tumor cell cohorts.
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| |
|
| Overall design |
8 total samples total comprised of two parental primary and two parental recurrent tumor cell lines, each in biological duplicate. Samples were analyzed in R by simplaffy and limma packages for differential gene expression analysis between primary and recurrent cohorts.
|
| |
|
| Contributor(s) |
Alvarez JV, Mabe NW |
| Citation(s) |
30148456 |
| NIH grant(s) |
| Grant ID |
Grant title |
Affiliation |
Name |
| R01 CA208042 |
Par-4 Regulation and Function in Breast Cancer Dormancy and Recurrence |
DUKE UNIVERSITY |
James V Alvarez |
|
| |
| Submission date |
Jul 02, 2018 |
| Last update date |
Oct 02, 2018 |
| Contact name |
Nathaniel Wesley Mabe |
| E-mail(s) |
[email protected]
|
| Organization name |
Dana-Farber Cancer Institute
|
| Department |
Pediatric Oncology
|
| Lab |
Kimberly Stegmaier
|
| Street address |
450 Brookline Avenue
|
| City |
Boston |
| State/province |
Massachusetts |
| ZIP/Postal code |
02215 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL8321 |
[Mouse430A_2] Affymetrix Mouse Genome 430A 2.0 Array |
|
| Samples (8)
|
|
| Relations |
| BioProject |
PRJNA478913 |
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